Questions tagged [r]
R is a free, open-source programming language and software environment for statistical computing, bioinformatics, and graphics.
289
questions
0
votes
1answer
17 views
How to install R statistics system and r-cran-tidyverse in Ubuntu 20.04?
I am trying to set up a new Ubuntu 20.04 server (to replace an older 18.04 server) which needs to have the R statistics system and, in particular, the r-cran-tidyverse package installed.
I am using ...
0
votes
0answers
15 views
E: The repository 'https://cloud.r-project.org/bin/linux/ubuntu disco-cran35/ Release' no longer has a Release file [duplicate]
On my Ubuntu 18.04, I had tried installing R.
When I run sudo apt update, I get this error:-
shekhar@shekhar-desktop:~$ sudo apt update
[sudo] password for shekhar:
Hit:1 http://dl.google.com/linux/...
1
vote
1answer
24 views
Sometimes commands do not terminate after upgrading to R 4.0 and Ubuntu 20.04
I have upgraded R (from 3.6 to 4.0) and RStudio (from 1.1 to 1.2.5) a few days ago, and Ubuntu from 18.04 to 20.04 yesterday.
Since then, R sometimes never terminates when executing certain commands: ...
0
votes
1answer
104 views
Problem installing R 4.0 on Ubuntu 18.04
R released an upgrade to version 4.0 about two weeks ago. I am trying to update R on my ubuntu 18.04 work station (sudo apt install r-base), but I am told that "r-base is already the newest version (...
0
votes
1answer
43 views
Installing R version 3.6.3 in Ubuntu 18.04 - “make” problem
I have already uninstalled the old R version and i'm trying to reinstall (My OS is Ubuntu 18.04). I am using these commands:
cd Downloads
tar -zxvf R-3.6.3.tar.gz
cd R-3.6.3
./configure --enable-R-...
-1
votes
1answer
42 views
(gedit:27981): WARNING / R upgrade [duplicate]
I'm working on a Ubuntu 18.04.2 LTS.
I wanted to upgrade R but I constantly get stuck.
I've entered
sudo gedit /etc/apt/sources.list
Where I add
deb https://cloud.r-project.org/bin/linux/...
2
votes
0answers
77 views
Attempt to install R 4.0 caused many prolbems
I tried to install R on Ubuntu 18, which was not successful.
sudo add-apt-repository 'deb cloud.r-project.org/bin/linux/ubuntu bionic-cran40/';
sudo apt update
sudo apt install r-base
After this ...
0
votes
0answers
25 views
QGIS installation on Ubuntu 18.04 fails after updating R sf package to version 0.9-3
I get the following error when trying to install QGIS on Ubuntu 18.04 and after updating R sf package to version 0.9-3:
The following packages have unmet dependencies:
qgis : Depends: gdal-abi-2-2-3
...
2
votes
1answer
95 views
Cannot use the solve() function in GNU R with Ubuntu 20.04
Yesterday I updated my Kubuntu 19.10 machine to 20.04 and I am happy with the upgrade so far. But I have spotted a critical issue with my GNU R installation after the update, and ask for your help.
...
2
votes
2answers
84 views
Cannot upgrade R
My system:
Ubuntu 18.04.4
Rscript --version
R scripting front-end version 3.4.4 (2018-03-15)
My problem:
Unsuccessful in upgrading R.
Steps:
sudo apt-get remove r-base r-base-dev
sudo add-apt-...
0
votes
1answer
122 views
Unable to locate package libicu60
I'm trying to install the R programming language on Ubuntu. I've followed these instructions but there appears to be missing dependency that I cannot install.
https://docs.rstudio.com/resources/...
0
votes
0answers
10 views
Ubuntu 19.10 doesn't respond: How can I know if an 'R - package' installation is responsable? And what to do later?
Recently, I tried to install the RforProteomics package opening R from the terminal and following the instructions in the Bioconductor project page:
if (!requireNamespace("BiocManager", quietly = ...
0
votes
3answers
314 views
Do I have to add the public key for the repository for installing R?
I follow https://cloud.r-project.org/bin/linux/ubuntu/README.html to install R
$ echo "deb https://cloud.r-project.org/bin/linux/ubuntu bionic-cran35/" | sudo tee -a /etc/apt/sources.list
$ sudo apt-...
1
vote
1answer
241 views
Installing ggplot2 for R 3.6 on Ubuntu 18.04
I have R 3.6 installed from the r-project.org repository, as instructed in this post from R Bloggers. Now I would like to install the ggplot2 package, but am not succeeding.
Usually I prefer to ...
0
votes
1answer
100 views
Error: Opening the cache (E:type 'sudo' is not known on line 1 in source list /etc/apt/sources.list.d/r-cran.list [duplicate]
I'm trying to install R. I tried the instructions from the best answer on a previous post, without success. I'm using ubuntu 16.04.6 LTS 64-bit.
I tried the method but my terminal window seemed to do ...
0
votes
1answer
143 views
Switch between different versions of a Program (R)
I have installed R couple years ago and yesterday I compiled a recent version from source.
I now have version 3.4.4 installed, and it's launched with R. Accordingly, I have these command returning ...
0
votes
0answers
32 views
Install R Cran package to local library location using apt
How can I install to a custom library location using apt to install an R package?
I'm trying to install dplyr on a 1gb ram machine, and the usual install.packages("dplyr",lib="/home/mycustomlib") ...
0
votes
0answers
33 views
Problem with R package install
I am using Ubuntu 19.10 and want to install R package. I try with instruction with the command:
sudo apt install r-base-core
and I get error with:
Reading package lists... Done
Building ...
1
vote
1answer
61 views
Upgrade R package on ec2 instance
The version of R is 3.4 and want to upgrade it to 3.6. Then I have followed the these steps:
sudo /bin/bash
and I just went to root.
Then remove the r-base core:
# apt-get remove r-base-core
...
0
votes
0answers
28 views
How do I use newly installed R version instead of old one?
I am trying to install R version 3.6.2 on Ubuntu. Before now, I had been using version 3.4.3 on Linux without any problems.
Initially when I tried to install with sudo apt-get install r-base, I ...
0
votes
1answer
55 views
Not installable libreadline6 (>= 6.0) while instaling R 3.6.2 on Ubuntu 18.14 LTS
I use 18.04.4 LTS (Bionic Beaver)
When I try to install R-base-core:
sudo apt install r-base-core
I see:
The following packages have unmet dependencies:
r-base-core : Depends: libreadline6 (>=...
3
votes
1answer
33 views
Installing R error
I've installed R in ubuntu 16.04.6 following this tutorial It seems Its correctly installed in
/usr/lib/R/bin/R
but It does not open when I just type
R
0
votes
0answers
171 views
Installing R-packages in R-Studio(Ubuntu 18.04)
I'm a week into Ubuntu 18.04, and just installed R and R Studio. Following the guide here; https://cran.r-project.org/bin/linux/ubuntu/README.html
I tried to install the needed packages, and these ...
0
votes
0answers
54 views
Can't install R package 32-bits in Ubuntu 18.04 64-bits
OS: Ubuntu 18.04 64 bits
R: 3.5.3 (2019-03-11) -- "Great Truth" - i686-pc-linux-gnu (32-bit)
I want to connect R to Firebird database. To accomplish this, I'm using unixODBC, Firebird super-server, ...
0
votes
0answers
23 views
Problems with graphic display of R studio
I'm new to Ubuntu (18.04.3 LTS) and installed R and R studio yesterday. While R works fine, R-Studio is not usable because the grapic display is inadequate ( see Screenshot of my desktop R Studio). It ...
2
votes
1answer
264 views
How to install R Cran Ecdat Package?
I tried to install R Cran's Ecdat package by the link https://cran.r-project.org/web/packages/Ecdat/index.html but it gives error. Even if I try with a odl version. Tried through the R Studio ...
1
vote
1answer
70 views
Install latest version of R with all the packages on Ubuntu 16.04
I am using Ubuntu 16.04. I want to install R (latest version) on it. As the system version is older, it can't find this version from terminal line. I checked it with this command on the terminal line.
...
1
vote
1answer
1k views
Trying to install R 3.6.1, but having issue in ubuntu
I am having installing latest update of R in ubuntu (18.04). I looked at so many previous suggestions, but yet not able to resolve the issue. I am still trying, any help or suggestion will be great.
...
0
votes
0answers
71 views
Install RKWard from Ubuntu repos: “The following packages have unmet dependencies.”
I'm trying to install RKward from the Ubuntu repositories, under Ubuntu 18.04.3 LTS.
Unfortunately I'm getting: The following packages have unmet dependencies., as I'm missing r-api-3.4 which ...
0
votes
1answer
97 views
How to exit interpreter I need to start from the shell?
I'm using R with kdb+/q. In order to access our data in kdb, there needs to be a running q process in the background on some port. What we usually do is run the command q -p 5000 & to initialize a ...
0
votes
0answers
22 views
Installing r-base: Some packages could not be installed [duplicate]
The following packages have unmet dependencies:
r-base : Depends: r-recommended (= 3.6.1-3bionic) but it is not going to be installed
E: Unable to correct problems, you have held broken packages.
0
votes
0answers
25 views
Allow R to write directory
I wanted to update R packages via R session and got the error
'lib = "/usr/lib/R/library"' is not writable
So I have the options of choosing a new directory for the packages or to make the directory ...
2
votes
2answers
1k views
Unable to install latest R version on Ubuntu 18.04 linux
I want to be able to install the latest stable R release for Ubuntu 18.04, I had the ubuntu version installed and so I removed it and then followed several guides like in this link.
No matter what I ...
0
votes
0answers
134 views
Failed to install R in Ubuntu
R --version
/usr/local/bin/R: line 248: /usr/local/lib/R/etc/ldpaths: No such file or directory
/usr/local/bin/R: line 271: /usr/local/lib/R/bin/exec/R: No such file or directory
Before it, I have ...
1
vote
0answers
27 views
Terminal Error : lmer() model- Error in valid(.Object)
I am trying to run a lmer() model on R (terminal supercomputer) the job is kind of big so I cannot run it time efficiently on my personal RStudio. I am running an test model: lmer(Yr_IT_RATE ~ Entry + ...
0
votes
0answers
52 views
How to call R when multiple versions are installed?
I have installed R-3.4.2 and R-3.6.1 on the same machines per instructions given here. How do I open an R session? I mostly use R on terminal and not the Rstudio GUI.
0
votes
0answers
93 views
Installing R on a VM Ubuntu Xenial v16.04
I have tried every conceivable way of installing R on this server and it will not work all I get is the below error. I realize this has been posted a few times but none of the approved answers work ...
0
votes
1answer
444 views
Trouble installing R and R studio in Elementary OS 5.0 Juno [closed]
I am attempting to install R and R Studio on Elementary OS 5.0 Juno. and after a few install methods, and attempting to remove previous packages and start with a fresh install, I am still getting the ...
0
votes
1answer
358 views
Permission denied while installing R package “ps”
I am running Ubuntu 18.04 on Windows 10 WSL. I originally installed R 3.6 following this guide: R-CRAN-Linux-Ubuntu-Installation. This question is related to: Permission denied while installing R ...
0
votes
2answers
2k views
libreadline.so.6 issue in ubuntu 18.04
I upgraded from Ubuntu 16.04 to Ubuntu 18.04 and cannot get R to run on it. I get the following error:
/usr/local/lib/R/bin/exec/R: error while loading shared libraries: libreadline.so.6: cannot ...
6
votes
1answer
1k views
Problem installing rJava with R 3.6 on ubuntu 18.04
I'm trying to install the rJava package in R 3.6.1 on Ubuntu 18.04. I've searched for similar questions but the answers provided don't seem to have worked for me.
Initially I tried sudo apt install r-...
0
votes
0answers
854 views
Force R to read folders outside of conda environment to install packages
I am using R in RStudio outside of a conda environment (I have miniconda3 installed to operate QIIME2). However, when I try installing R packages, I am always getting errors as R is always looking in ...
0
votes
1answer
341 views
Problem installing R package with lblas and lapack dependencies
I am trying to install the HMSC R package into RStudio Version 1.2.1335 and R version 3.6.1 (2019-07-05) -- "Action of the Toes" on a Linux Ubuntu
18.04.2 LTS System
The code to install through R ...
2
votes
2answers
3k views
Permission denied while installing R package
I've installed R (version 3.6.0) on my ubuntu 18.04 which I run on the windows subsystem WSL.
Now I'm having a problem to install some specific packages. For example xml2. When I run the command ...
3
votes
2answers
3k views
I am unable to install latest version of R
I am trying to install the latest version of R into Ubuntu 16.04.
But somehow it installs 3.4.4 even though latest version of R is 3.6.1. I have also read some articles that state "To obtain the ...
1
vote
1answer
457 views
pdflatex not found while installing “R” software on Ubuntu 19.04
I am trying to install R software on Ubuntu 19.04, by compiling the installer on my system. Several libraries are missing, but I managed to install them all, apart from one called 'pdflatex'.
...
0
votes
0answers
121 views
Rstudio aborted when i try to run keras
I have ubuntu 18.04 and when i try to run the follow code in Rstudio:
model1 <- keras_model_sequential()
i received this error message:
Error: Keras loaded from tensorflow v1.4, however version ...
0
votes
0answers
265 views
How do I install the tidyverse R package in Ubuntu 19.04?
When I attempt to install the tidyverse R package in Ubuntu 19.04 the package does not install correctly. This can be resolved by opening terminal, {ctl}+{alt}+t, and submitting the following three ...
1
vote
2answers
2k views
Package r-base-core is not configured yet in Ubuntu 18.04.2
I used sudo dpkg --configure -a but it shows like below.
dpkg: dependency problems prevent configuration of r-cran-class:
r-cran-class depends on r-base-core (>= 3.5.0-1); however:
Package r-...
0
votes
0answers
76 views
How can I reinstall the latest version of R package on Ubuntu virtualbox after I remove the old one? [duplicate]
I tried to remove the old R version after I installed, then I reinstall it but I cannot because it shows me the following things. I want to install R 3.6 in Ubuntu but I cannot even R 3.5 as it always ...
