Questions tagged [anaconda]

This tag should be used for questions regarding the Anaconda Python and R distribution.

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No ':' in the uri. Can't open my anaconda file

I downloaded Anaconda on my Ubuntu and tried to start the Program. Everytime I start it, I get following error Message: Invalid url:'/home/fzoozai/Downloads/ANaconda3--2022.05-Linux-x86' given, ...
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How to connect local Windows applications like Conda and MySQL from Ubuntu on WSL2?

I have recently installed WSL2 (Ubuntu) in Windows 11 to learn about its commands and working with. Everything is working fine, but I am unable to access my Windows applications from within Ubuntu. ...
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Ubuntu 20.04 libGL error Messages when Start Anaconda3

After Install Anaconda in Ubuntu 20.04 and launch it using anaconda-navigatorthis error Messages appear libGL error: MESA-LOADER: failed to open crocus: /usr/lib/dri/crocus_dri.so: cannot open shared ...
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Problem with Python version and Update Manager

I am sort of new with Linux, so forgive me if I mixed up or misuse concepts here. I have Ubuntu 20.04.4 LTS and recently I created a new user in Linux for a project I am doing. From my main user (...
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conda environment can't find distutils.core after upgrade to 22.04

After upgrading to Ubuntu 22.04, python setup.py fails with: ModuleNotFoundError: No module named 'distutils.core' in response to an attempt to cythonize a .pdx file. Attempts to do anything along ...
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conda update removed conda

I have just updated conda, and I fell into an error from which I could not recover so far. I am copying here the essential lines that illustrate the apparent problem (and below the full output). The ...
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Conda hangs when installing new Python version

Some of the output of conda search python is: # Name Version Build Channel python 3.9.0 h2a148a8_4_cpython conda-forge ...
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Removing conda from path

echo $PATH [OUT] /home/cmaspi/anaconda3/bin /home/cmaspi/.local/bin /usr/local/sbin /usr/local/bin /usr/sbin /usr/bin /sbin /bin /usr/games /usr/local/games /snap/bin I've already removed anaconda3 ...
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Fish does not run as conda base by default

I have installed Fish on my Ubuntu, but every time I open my terminal I have to run the bash command to initiate conda base. I hadn't this problem with ZSH in the past. Is there any solution to make ...
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Change conda environment to the preinstalled system Python version

I switched to Linux completely 4months ago. I have been able to install Anaconda in my Ubuntu 20.04, but I observed something which is like a headache. After setting up an environment, I needed to ...
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Problem to run "anaconda-navigator"

I was not able to run the command anaconda-navigator, so I followed the following procedure: $ source ~/anaconda3/bin/activate root $ anaconda-navigator After this, Anaconda Navigator opened, but ...
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Anaconda not working with Ubuntu 21.10

I updated my Ubuntu box few days ago to latest version 21.10. Now, I am getting several errors running well-functioning Pythons software. even the Ananconda Navigator (updated too) isn't working. Here ...
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How do i run a python script from a windows partition using the python interpreter from anaconda in ubuntu?

As the question suggests i have a dual boot set up with python scripts stored in my windows partition. I have ubuntu installed on a separate HDD and can successfully run python files that are stored ...
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pip Error when using Anaconda Environment

When I have an active conda environment and I enter pip I get the following error: Traceback (most recent call last): File "/home/philip/anaconda3/bin/pip", line 7, in <module> ...
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How can I resolve this Anaconda launch problem?

When I launch anaconda in Ubuntu using 'anaconda-navigator' the screen has a glitchy window: Anaconda launches after about 5 min. I have tried reinstalling multiple times but the problem persists. ...
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Difference between Anaconda prompt and command prompt

I recently swapped over from Windows to Ubuntu. In Windows when I did any sort of coding I used the anaconda prompt which was separate to the command prompt to run any commands relevant to python. ...
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Pandoc Markdown error

I tried to complile a markdown document into RStudio, but when I knit it I get the following output: /home/argus/anaconda3/envs/R-lab/bin/pandoc/pandoc: error while loading shared libraries: libgmp.so....
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Error when installing RStudio in Anaconda: `/opt/anaconda3/lib/R/bin/exec/R: error while loading shared libraries: libreadline.so.6:

I am currently trying install Anacondas RStudio version. Already I have R installed from the official CRAN repositories through apt package manager and the newest version of RStudio. My current ...
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2 answers
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What am i doing wrong in Conda?

I am a first time user of of Anaconda & Miniconda suite and I have been having problems running code using it. Every time I try to run a python script in Anaconda or miniconda it comes up with ...
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701 views

Matplotlib complains about not finding Qt platform plugin "wayland"

I have trouble getting Matplotlib to work on Ubuntu 21.04. Whenever I want to plot something I'm getting the following error message: qt.qpa.plugin: Could not find the Qt platform plugin "wayland&...
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cannot install anaconda in ubuntu 20.04

I am trying to install anaconda. In my computer. I already had anaconda, but I uninstalled that, now again I am reinstalling it, but I am facing a weird error. that: subprocess.CalledProcessError: ...
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How to install Anacoda Navigator on Ubuntu 21.04?

I have shifted from Windows 10 yesterday and I wanted to install Anaconda Navigator as I am just gonna began my programming journey from python, Please guide me how to do it.
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No option to maximize in Anaconda Navigator Window

I recently switched to Ubuntu from windows. When opening anaconda-navigator the application is opened as below. There is no maximize button available. Searched multiple sites but still don't ...
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I can't install packages with conda, even so anaconda was correctly installed? (Fresh Ubuntu 20.04 LTS Setup)

I wanted to install pandas on my fresh installation of Ubuntu 20.04 LTS (updated it first). What i did: I followed the installation instructions on: https://docs.anaconda.com/anaconda/install/linux/ (...
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How to run my Python script with Anaconda environment in crontab?

I want to schedule a task with crontab to run a python file in a specific anaconda environment every day at a certain time. I have a python script to do so. The python script runs if I just execute it ...
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Use "source" within 'script' command

I want to use the script command to see my output both in the command line and also store it at the same time, as suggested here. Now, I can do in my command line: script source activate foo python ...
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Troubleshooting KVM's guest anaconda installer logs

I am trying to install RHEL7.9 KVM guest on Ubuntu 18.04 Azure VM. The anaconda installer fails due to some error but the virt-viewer screen got closed so fast, I was unable to read what is the exact ...
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Anaconda change 'base' environment permanently to a different environment 'myenv' to startup at terminal openings

I would like to change the base install environment that initiates when I start a terminal to a different environment that I have created called myenv anaconda environment. I want myenv to start every ...
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Some confusion with conda / pip installations of PyQt5 on my Ubuntu 20.04

Context I wanted to install PyQt5 in my conda base environment, along with some other libraries. I have completed this task in different sessions. The problem is that when I went in Visual Studio Code ...
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How to change the R path?

I have some problems with using R and Rstdio along with my Jupyter notebook and r in my ubuntu 20.04. I first installed R and Rstudio. This version of R was the latest. (4.0.5). Then I installed ...
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conda install -c bioconda simlord | UnsatisfiedError

Following this tutorial and two installation steps, I want to run SimLoRD. On Ubuntu 18.04, using a Python 3.9 venv: conda install -c bioconda simlord UnsatisfiedError Terminal output I have tried ...
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Anaconda Python

Hello I just wanted to ask that when I use my terminal to download anaconda python on the last step it automatically says no. Can anyone tell me what to do:
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138 views

anaconda environment in VS-Code can't find anaconda libraries

I am trying to run some python code with VS Code in an anaconda environment and I get an error: ImportError: libpython3.7m.so.1.0: cannot open shared object file: No such file or directory. my working ...
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How to switch back and forth between Conda and Pyenv without restarting terminal?

I'm using both conda and pyenv and would like to switch between both while staying in the same terminal. The entries to initialize both in my .bashrc look as follows: # >>> conda initialize &...
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Every time I open the terminal, it SAYS

bash: path-to-mcu-package: No such file or directory I tried checking with, source ~/.bashrc bash: path-to-mcu-package: No such file or directory Although,when I do cd ~ && ls -la, I see -rw-...
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2 votes
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Enable multi-line paste for conda python shell on 18.04

I am running ubuntu 18.04 and have started using conda 4.9.2 to set up python environments. As this is a remote machine, I often copy and paste short multi-line code snippets for development purposes. ...
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Installed unneeded dependencies [closed]

This is my first time using Ubuntu and I was doing well until I made this mistake. I can't tell if it's a big deal. While installing Anaconda, I accidentally ran this command to install the ...
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1 vote
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540 views

Conda libraries not loading in PyCharm

So, i can't seem to have PyCharm work correctly with Conda. I installed Anaconda following step by step the procedure on their site (download bash script, execute it). It is installed in ~/anaconda3, ...
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487 views

Problems installing miniconda

I'm trying to install Miniconda in a Linux server. I don't have root/sudo access, so I'm using these steps: Download the Miniconda installer: wget https://repo.continuum.io/miniconda/Miniconda3-...
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Anaconda Navigator gets stuck at loading applications in Ubuntu 20.04 even after updating Anaconda Navigator

I tried opening Anaconda Navigator as root and it got stuck at "loading applications" and gave this error: Traceback (most recent call last): File "/home/karuna63/anaconda3/lib/...
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2 votes
1 answer
5k views

sh: 1: python: not found when execute python script from php

I'm tring to execute a python script call from php with the command below: $output = shell_exec('python /var/www/html/sna/server/userManagement.py '. $user.' '. $pass .' \''.$action.'\' 2>&1'); ...
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Really REALLY want to install the same Enviroment of a laptop on my machine

I have a serious issue, which I'm going to address as fast as possible: I had a very old laptop, where I run a script related to a uni project. Laptop didn't close for ages, and now the battery died. ...
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What's the solution of anaconda installation in ubuntu 20.04 (fresh installed)

I've tried the following command after downloading the Anaconda installer. *** Notebook:~$ Downloads/Anaconda3-2020.07-Linux-x86_64.sh bash: Downloads/Anaconda3-2020.07-Linux-x86_64.sh: Permission ...
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Installing Ananconda on Ubuntu 20.04, many erros

Disclaimer: I'm very very new to Linux. Background: I'm having issues installing Anaconda on my Ubuntu 20.04. I am running this off of my USB stick on a PC. I tried downloading the community pycharm ...
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conda : command is not found

$ wget "https://repo.continuum.io/archive/Anaconda2-5.0.1-Linux-x86_64.sh" $ chmod u+x ./Anaconda2-5.0.1-Linux-x86_64.sh $ ./Anaconda2-5.0.1-Linux-x86_64.sh $ bash I ran the above commands ...
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Ubuntu20: nothing happens when I try to run Anaconda install script

I have downloaded the current version of Anaconda to my Downloads folder. In Terminal I CD’d to the folder and tried bash Anaconda3-2020.07-Linux-x86_64.sh Nothing happens except that a fresh prompt ...
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1 answer
945 views

How do you get 'sudo' privilege for a program in a conda virtual environment?

As with the title, how can I run a program installed within a conda environment with sudo privileges? This thread(sudo: conda: command not found) mentioned that conda commands cannot be granted super ...
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209 views

Terminator & conda: Start Window in conda environment

I am sitting here and cannot believe why it is so hard to make a terminator window use a conda environment at startup AND keep open for further commands. I have tried different approaches but all lead ...
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2k views

No such file or directory: '/home/mona/anaconda3/lib/python3.7/site-packages/google_pasta-0.2.0.dist-info/METADATA'

How can I install tensorflow gpu 1.14 in Ubuntu 20.04? Using the following command I got the error (base) mona@mona:~$ pip install tensorflow-gpu==1.14 Collecting tensorflow-gpu==1.14 Downloading ...
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import tensorflow as tf Segmentation fault (core dumped) in Ubuntu 20.04

I need to install tensorflow 1.14 for DeepLabCut and I got a segmentation fault. How do I fix it? I also prefer to install the GPU version. Not sure if this is the most standard way of installing it. (...
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