Questions tagged [anaconda]
This tag should be used for questions regarding the Anaconda Python and R distribution.
215
questions
1
vote
0answers
19 views
No option to maximize in Anaconda Navigator Window
I recently switched to Ubuntu from windows. When opening anaconda-navigator the application is opened as below. There is no maximize button available. Searched multiple sites but still don't ...
0
votes
0answers
10 views
Anaconda 3 / installed python possible incompatibility
I have installed anaconda3 trying to run a certain pipeline but I think I have run into incompatibility errors.
For anaconda I created an enviroment with conda create -n name python=3.6 but it seems ...
-1
votes
0answers
28 views
Anaconda-navigator GUI window is not maximized (on the right size) [closed]
I am using Ubuntu 20.04 LTS. I installed Anaconda Navigator but its window is not showing data on right side.
How can I solve this?
0
votes
1answer
40 views
I can't install packages with conda, even so anaconda was correctly installed? (Fresh Ubuntu 20.04 LTS Setup)
I wanted to install pandas on my fresh installation of Ubuntu 20.04 LTS (updated it first).
What i did:
I followed the installation instructions on:
https://docs.anaconda.com/anaconda/install/linux/
(...
0
votes
1answer
55 views
How to run my Python script with Anaconda environment in crontab?
I want to schedule a task with crontab to run a python file in a specific anaconda environment every day at a certain time. I have a python script to do so.
The python script runs if I just execute it ...
0
votes
1answer
59 views
Use “source” within 'script' command
I want to use the script command to see my output both in the command line and also store it at the same time, as suggested here.
Now, I can do in my command line:
script
source activate foo
python ...
0
votes
0answers
12 views
Launching Anaconda more easily on 18.04
I'm fairly new with Ubuntus in general, and I was recommended 18.04 because of another project I'm working on. To launch Anaconda, I need to always open a terminal and type in source ~/anaconda3/bin/...
0
votes
1answer
32 views
Troubleshooting KVM's guest anaconda installer logs
I am trying to install RHEL7.9 KVM guest on Ubuntu 18.04 Azure VM. The anaconda installer fails due to some error but the virt-viewer screen got closed so fast, I was unable to read what is the exact ...
1
vote
1answer
55 views
Anaconda change 'base' environment permanently to a different environment 'myenv' to startup at terminal openings
I would like to change the base install environment that initiates when I start a terminal to a different environment that I have created called myenv anaconda environment.
I want myenv to start every ...
0
votes
0answers
42 views
How do I get rid of this old numpy version that remains even after I uninstalled numpy in all possible ways?
I am using conda to manage my python packages. Running conda install numpy installs numpy 1.20. However, in my ~/anaconda3/lib/python3.8/site-packages/ directory, there is an old version of numpy (1....
0
votes
0answers
117 views
Some confusion with conda / pip installations of PyQt5 on my Ubuntu 20.04
Context
I wanted to install PyQt5 in my conda base environment, along with some other libraries. I have completed this task in different sessions. The problem is that when I went in Visual Studio Code ...
0
votes
0answers
149 views
How to change the R path?
I have some problems with using R and Rstdio along with my Jupyter notebook and r in my ubuntu 20.04. I first installed R and Rstudio. This version of R was the latest. (4.0.5). Then I installed ...
0
votes
1answer
26 views
conda install -c bioconda simlord | UnsatisfiedError
Following this tutorial and two installation steps, I want to run SimLoRD.
On Ubuntu 18.04, using a Python 3.9 venv:
conda install -c bioconda simlord
UnsatisfiedError
Terminal output
I have tried ...
0
votes
1answer
30 views
Anaconda Python
Hello I just wanted to ask that when I use my terminal to download anaconda python on the last step it automatically says no. Can anyone tell me what to do:
1
vote
0answers
58 views
anaconda environment in VS-Code can't find anaconda libraries
I am trying to run some python code with VS Code in an anaconda environment and I get an error: ImportError: libpython3.7m.so.1.0: cannot open shared object file: No such file or directory.
my working ...
0
votes
0answers
45 views
Python - pymc and pymc3
Anyone have a solution for installing pymc or pymc3? I tried pip installing it in Jupiter Notebooks and installing it in the terminal "conda install -c conda-forge pymc3" ... but I'm still ...
0
votes
1answer
58 views
How to switch back and forth between Conda and Pyenv without restarting terminal?
I'm using both conda and pyenv and would like to switch between both while staying in the same terminal.
The entries to initialize both in my .bashrc look as follows:
# >>> conda initialize &...
0
votes
0answers
38 views
syntax error while installing anaconda for Windows Linux Subsystem
I have followed this guide for installing Anaconda:
https://gist.github.com/kauffmanes/5e74916617f9993bc3479f401dfec7da
After using wget to download Anaconda3-2020.11-Linux-x86_64.sh, I tried to ...
0
votes
1answer
35 views
Every time I open the terminal, it SAYS
bash: path-to-mcu-package: No such file or directory
I tried checking with,
source ~/.bashrc
bash: path-to-mcu-package: No such file or directory
Although,when I do cd ~ && ls -la, I see -rw-...
1
vote
0answers
123 views
Enable multi-line paste for conda python shell on 18.04
I am running ubuntu 18.04 and have started using conda 4.9.2 to set up python environments. As this is a remote machine, I often copy and paste short multi-line code snippets for development purposes.
...
0
votes
0answers
29 views
How to use Python “import gi” with conda
I saw the link [here][1]
and I see how to use gi if I don't use conda. But I would like to use gi with a virtual environment. I tried
conda install python-gi
and
pip install python-gi
```
but it say ...
0
votes
2answers
67 views
Installed unneeded dependencies [closed]
This is my first time using Ubuntu and I was doing well until I made this mistake. I can't tell if it's a big deal.
While installing Anaconda, I accidentally ran this command to install the ...
1
vote
1answer
185 views
Conda libraries not loading in PyCharm
So, i can't seem to have PyCharm work correctly with Conda.
I installed Anaconda following step by step the procedure on their site (download bash script, execute it). It is installed in ~/anaconda3, ...
0
votes
0answers
16 views
Impossible to activate a conda environment by shell script [duplicate]
I would like to activate a conda environment by a shell script, as suggested here, I have tried:
#!/bin/bash -i
source $(conda info --base)/etc/profile.d/conda.sh
conda activate myenv
but it doesn't ...
0
votes
1answer
86 views
Problems installing miniconda
I'm trying to install Miniconda in a Linux server. I don't have root/sudo access, so I'm using these steps:
Download the Miniconda installer:
wget https://repo.continuum.io/miniconda/Miniconda3-...
0
votes
0answers
13 views
Creating a local version of a cloud system and environments
Question: How do I make a local system that is very similar to a cloud system? For my use case, I want to be able to use locally all the same conda environments that are on the cloud. How do I copy ...
2
votes
1answer
590 views
Anaconda Navigator gets stuck at loading applications in Ubuntu 20.04 even after updating Anaconda Navigator
I tried opening Anaconda Navigator as root and it got stuck at "loading applications" and gave this error:
Traceback (most recent call last):
File "/home/karuna63/anaconda3/lib/...
0
votes
0answers
123 views
Issue install armadillo, is it cmake issue with anaconda3
While calling cmake . for installing armadillo I get warnings in addition to unwanted ARMA_HDF5_INCLUDE_DIR = /home/coyote/anaconda3/include (why does it always choose anaconda for this?). Warnings ...
2
votes
1answer
2k views
sh: 1: python: not found when execute python script from php
I'm tring to execute a python script call from php with the command below:
$output = shell_exec('python /var/www/html/sna/server/userManagement.py '. $user.' '. $pass .' \''.$action.'\' 2>&1');
...
0
votes
0answers
19 views
Ananconda and Ubuntu
What are some recommended resource on learning how to run the Anaconda packages with the terminal in Ubuntu ? ( I am new to python, new to programing, new to Ubuntu )
1
vote
0answers
193 views
Really REALLY want to install the same Enviroment of a laptop on my machine
I have a serious issue, which I'm going to address as fast as possible:
I had a very old laptop, where I run a script related to a uni project. Laptop didn't close for ages, and now the battery died. ...
0
votes
0answers
270 views
What's the solution of anaconda installation in ubuntu 20.04 (fresh installed)
I've tried the following command after downloading the Anaconda installer.
***
Notebook:~$ Downloads/Anaconda3-2020.07-Linux-x86_64.sh
bash: Downloads/Anaconda3-2020.07-Linux-x86_64.sh: Permission ...
1
vote
0answers
70 views
Installing Ananconda on Ubuntu 20.04, many erros
Disclaimer: I'm very very new to Linux.
Background: I'm having issues installing Anaconda on my Ubuntu 20.04. I am running this off of my USB stick on a PC. I tried downloading the community pycharm ...
1
vote
0answers
1k views
conda : command is not found
$ wget "https://repo.continuum.io/archive/Anaconda2-5.0.1-Linux-x86_64.sh"
$ chmod u+x ./Anaconda2-5.0.1-Linux-x86_64.sh
$ ./Anaconda2-5.0.1-Linux-x86_64.sh
$ bash
I ran the above commands ...
0
votes
0answers
44 views
Anaconda3 - spyder can't find 'system-externals'
from Anaconda-navigator, I launch 'spyder' - linked to 'Spyder4' and get the error starting the kernel. the message says to install 'spyder‑kernels', and i've tried both way, conda and pip, and ...
0
votes
0answers
217 views
Ubuntu20: nothing happens when I try to run Anaconda install script
I have downloaded the current version of Anaconda to my Downloads folder. In Terminal I CD’d to the folder and tried
bash Anaconda3-2020.07-Linux-x86_64.sh
Nothing happens except that a fresh prompt ...
0
votes
1answer
390 views
How do you get 'sudo' privilege for a program in a conda virtual environment?
As with the title, how can I run a program installed within a conda environment with sudo privileges?
This thread(sudo: conda: command not found) mentioned that conda commands cannot be granted super ...
1
vote
0answers
126 views
Terminator & conda: Start Window in conda environment
I am sitting here and cannot believe why it is so hard to make a terminator window use a conda environment at startup AND keep open for further commands.
I have tried different approaches but all lead ...
0
votes
1answer
2k views
No such file or directory: '/home/mona/anaconda3/lib/python3.7/site-packages/google_pasta-0.2.0.dist-info/METADATA'
How can I install tensorflow gpu 1.14 in Ubuntu 20.04?
Using the following command I got the error
(base) mona@mona:~$ pip install tensorflow-gpu==1.14
Collecting tensorflow-gpu==1.14
Downloading ...
0
votes
0answers
1k views
import tensorflow as tf Segmentation fault (core dumped) in Ubuntu 20.04
I need to install tensorflow 1.14 for DeepLabCut and I got a segmentation fault. How do I fix it? I also prefer to install the GPU version. Not sure if this is the most standard way of installing it.
(...
1
vote
1answer
938 views
Permission denied error while using wget
I am trying to install Anaconda on WSL in the /mnt/c/Windows/System32 directory and use the following command:
sudo wget https://repo.anaconda.com/archive/Anaconda3-2019.03-Linux-x86_64.sh
However, I ...
2
votes
1answer
79 views
Messed up Python3.6 on Ubuntu 16.04
I installed anaconda and run 'sudo apt-get update && sudo apt-get dist-upgrade' on an Ubuntu 16.04 system. I upgraded pip inside an Anaconda environment and also used the 'sudo apt-get ...
1
vote
1answer
297 views
Silent Anaconda installation
I need to install Anaconda to the Docker container with Ubuntu. But after I copy and execute the installer it asks to agree with the license agreement. Is there any way to make a silent installation?
2
votes
0answers
509 views
Not able to activate conda environment through os.system command in python
I want to activate activate a conda environment before running my python file through os.system command, but unfortunately, I am not able to activate the conda environment.
Following is the command I ...
1
vote
1answer
248 views
No indication of activated conda environment in terminal
Problem
I have a local conda environment in a folder, but when I activate it, I get no indication of having done so. I know that it is activated because if I, as an example, try to remove it, it will ...
1
vote
1answer
438 views
Can't Activate Environment // Ubuntu // Conda
I downloaded Anaconda 3 on Ubuntu VM. The conda command wasn't working so I used this command:
source ~/.bashrc
but it didn't work. Then I tried this command:
export PATH=~/anaconda3/bin:$PATH
This ...
0
votes
1answer
424 views
Installing Anaconda on Ubuntu 20.04 [duplicate]
I am trying to install Anaconda on my Ubuntu 20.04.
I downloaded the installer on the official site. Then I run the command:
sudo ./Anaconda3-2020.02-Linux-x86_64.sh
And followed the steps in the ...
2
votes
1answer
348 views
/usr/lib and Conda Environments
I am trying to understand the proper way to go about solving an issue.
Background: I have Anaconda installed with the default python 3.7.7
Ubuntu 20.04 LTS
I am trying to run a program with python ...
2
votes
2answers
2k views
How can I download and install miniconda?
I'm a brand new linux user, so please let me know if I'm missing something super obvious here.
I'm using the newest release of ubuntu, 20 04.
I've tried downloading miniconda from their website (...
1
vote
1answer
154 views
Firefox launches Anaconda Navigator
I'm running Firefox 75.0 and Anaconda3-2020.02 on Ubuntu Desktop 18.04
I've just installed Anaconda Navigator and created a launcher for it by following the accepted answer to this question.
...
