Questions tagged [anaconda]
This tag should be used for questions regarding the Anaconda Python and R distribution.
239
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Conda Environment
I am trying to create an environment using this https://github.com/mbareera/MuSA/blob/master/MuSA.yml file but I am getting error below. I am using conda 22.11.1 version. Can anyone help how I can ...
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14
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Upgrading Ubuntu 18.04 to 20.04 and anaconda enviroments
I have a computer that runs Ubuntu 18.04 and I'm considering upgrading to 20.04. I use python virtual environments (through Anaconda) for handling scientific computing projects. Do I need to reinstall ...
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269
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libGL error: failed to load drivers iris and swrast in Ubuntu 22.04
I'm trying to run a pong game (pygame) in Python (VSCode) using a conda environment and I get this:
pygame 2.3.0 (SDL 2.24.2, Python 3.9.16)
Hello from the pygame community. https://www.pygame.org/...
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292
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Problem installing Whisper with Anaconda
I'm trying to install whisper. I'm doing it with help from this guide https://www.youtube.com/watch?v=nwPaRSlDSaY since I'm a total beginner at Ubuntu (I only know 3 commands).
My version of Ubuntu ...
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196
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Launching Anaconda-Navigator fails
Anaconda worked well previously on 22.04.1 LTS but some. Now I'm getting the following error when trying to launch it. I tried reinstalling it but with no success.
2023-03-24 11:26:28,514 - WARNING ...
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0
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17
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Error installing anaconda on Kubuntu
I am trying to install anaconda on kubuntu but I keep getting this error in the attached picture.
What could be the issue?kubuntu terminal
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1
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1
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115
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Can`t launch anaconda3 on ubuntu
I`m just trying to launch anaconda with command anaconda-navigator and terminal printing out this:
matviiuk@matviiuk-desktop:/media/matviiuk/DiskD/WorkPrograms/anaconda3/bin$ anaconda-navigator
2023-...
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171
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Install Anaconda Navigator on Ubuntu 22.04 Raspberry Pi 4B with 8 GB RAM , Error: "Your operating system appears not to be 64-bit"
Im trying to install the anaconda navigator on my raspberry pi with ubuntu 22.04.
When i follow the tutorial, you need to use „Anaconda3-2022.10-Linux-x86_64.sh“ (latest Version). After downloading it,...
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166
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Illegal Construction in Anaconda or Miniconda
When I try to install either of them, I encounter a message like this
Miniconda3-py39_22.11.1-1-Linux-aarch64.sh: line 412: 10882 Illegal instruction (core dumped) "$CONDA_EXEC" ...
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14
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Ananconda jupterlab access grive file like colab?
It is possbile to mount gdrive like colab doing in anaconda local jupyter lab?
I have tried jupterdrive but not working.
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578
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Since ubuntu 22.04, anaconda-navigator launching errors : warning linux-scaling, Ignoring XDG_SESSION_TYPE, libGL error
Here is my problem : I use jupyterlab across anaconda navigator. Everything was fine on Ubuntu 18 LTS. Since I updated Ubuntu 18 LTS to 22.04 LTS when I run anaconda-navigator in a terminal the ...
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86
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Error message while initializing Anaconda
I'm having the following error message while trying to initialize the Anaconda Application. Would appreciate if you anyone guide me to solve the issues and explain the cause of the error message. ...
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115
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system dependency of librsvg2-dev at Ubuntu when using R at a conda environment
I have a problem with the system dependency of librsvg2-dev at Ubuntu 22.04 when using R at a conda environment
The library librsvg2-dev is already installed and updated, but not recognized as so, ...
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205
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Updating conda in Ubuntu 22.04 has CondaVerificationError
I wanted to update the conda environment installet on ubuntu 22.04 LTS.
I started with
conda update --all
The update packages were downloaded. Then the below error occurred.
Preparing transaction: ...
1
vote
1
answer
713
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conda cammand not found after Anaconda install
I just installed Anaconda as instructed from the homepage.
Downloaded installer
checked sum:
$ shasum -a 256 ~/Downloads/Anaconda3-2022.10-Linux-x86_64.sh
...
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1
answer
375
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How to remove a directory from root?
I was trying to download anaconda3 on my WSL using the command sudo bash Anaconda*-*-Linux-x86_64.sh but the installation was taking a while so I decided to stop it using Ctrl+C, but later when I ...
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2
answers
241
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How to remove a directory's path from the enviroment variable PATH permanently?
I just removed the miniconda3's folder from home/username/, now i want to remove its path from my $PATH variable permanently.
As you can see below, it's the first one:
/home/username/miniconda3/bin:/...
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0
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391
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Updating Anaconda on Ubuntu 22.04 encounters "unexpected error"
When I try to update Anaconda on linux Ubuntu 22.04 using conda update --all, I receive the error An unexpected error has occurred. Conda has prepared the above report.
This has been happening every ...
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1
answer
2k
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AttributeError: module 'lib' has no attribute 'X509_V_FLAG_CB_ISSUER_CHECK' - Anaconda also crashing on launch
I was trying to install cx_Oracle earlier today and in doing so, I somehow messed something up and now I am having this error whenever I try to run anything with pip including pip list. Pip3 list ...
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1
answer
364
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Installing anaconda - wrong “SHA-256” checksum?
I want to install anaconda on Ubuntu 22.04 following this instruction: https://linuxhint.com/install-anaconda-ubuntu-22-04/
In step 3, I used the following code:
$ curl --output anaconda.sh https://...
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125
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perl can't see path problem ubuntu 20.04.4 anaconda
Hi Im trying to run pfam_scan.pl (bioinformatics)
Im using conda but theres is perl from ubuntu system... Its conflicts with another? Or script can't see modules?
$ pfam_scan.pl
Can't locate Moose.pm ...
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3
answers
21k
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GLIBCXX 3.4.30 not found in conda environment
I am installing a package with pip in my conda environment and I keep getting this error:
ImportError: /home/anavani/anaconda3/envs/dmcgb/bin/../lib/libstdc++.so.6: version `GLIBCXX_3.4.30' not found (...
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35
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No ':' in the uri. Can't open my anaconda file
I downloaded Anaconda on my Ubuntu and tried to start the Program. Everytime I start it, I get following error Message:
Invalid url:'/home/fzoozai/Downloads/ANaconda3--2022.05-Linux-x86' given, ...
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1
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672
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How to connect local Windows applications like Conda and MySQL from Ubuntu on WSL2?
I have recently installed WSL2 (Ubuntu) in Windows 11 to learn about its commands and working with. Everything is working fine, but I am unable to access my Windows applications from within Ubuntu.
...
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874
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Ubuntu 20.04 libGL error Messages when Start Anaconda3
After Install Anaconda in Ubuntu 20.04 and launch it using anaconda-navigatorthis error Messages appear
libGL error: MESA-LOADER: failed to open crocus: /usr/lib/dri/crocus_dri.so: cannot open shared ...
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answers
109
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conda update removed conda
I have just updated conda, and I fell into an error from which I could not recover so far.
I am copying here the essential lines that illustrate the apparent problem (and below the full output).
The ...
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1
answer
1k
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Conda hangs when installing new Python version
Some of the output of conda search python is:
# Name Version Build Channel
python 3.9.0 h2a148a8_4_cpython conda-forge
...
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735
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Removing conda from path
echo $PATH
[OUT] /home/cmaspi/anaconda3/bin /home/cmaspi/.local/bin /usr/local/sbin /usr/local/bin /usr/sbin /usr/bin /sbin /bin /usr/games /usr/local/games /snap/bin
I've already removed anaconda3 ...
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2
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1
answer
1k
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Fish does not run as conda base by default
I have installed Fish on my Ubuntu, but every time I open my terminal I have to run the bash command to initiate conda base. I hadn't this problem with ZSH in the past.
Is there any solution to make ...
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answer
2k
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Change conda environment to the preinstalled system Python version
I switched to Linux completely 4months ago. I have been able to install Anaconda in my Ubuntu 20.04, but I observed something which is like a headache.
After setting up an environment, I needed to ...
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7k
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Problem to run "anaconda-navigator"
I was not able to run the command anaconda-navigator, so I followed the following procedure:
$ source ~/anaconda3/bin/activate root
$ anaconda-navigator
After this, Anaconda Navigator opened, but ...
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1
answer
221
views
How do i run a python script from a windows partition using the python interpreter from anaconda in ubuntu?
As the question suggests i have a dual boot set up with python scripts stored in my windows partition.
I have ubuntu installed on a separate HDD and can successfully run python files that are stored ...
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1k
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How can I resolve this Anaconda launch problem?
When I launch anaconda in Ubuntu using 'anaconda-navigator' the screen has a glitchy window:
Anaconda launches after about 5 min. I have tried reinstalling multiple times but the problem persists. ...
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1
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458
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Difference between Anaconda prompt and command prompt
I recently swapped over from Windows to Ubuntu.
In Windows when I did any sort of coding I used the anaconda prompt which was separate to the command prompt to run any commands relevant to python.
...
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1
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1
answer
335
views
Pandoc Markdown error
I tried to complile a markdown document into RStudio, but when I knit it I get the following output:
/home/argus/anaconda3/envs/R-lab/bin/pandoc/pandoc: error while loading shared libraries: libgmp.so....
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1
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2k
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Error when installing RStudio in Anaconda: `/opt/anaconda3/lib/R/bin/exec/R: error while loading shared libraries: libreadline.so.6:
I am currently trying install Anacondas RStudio version. Already I have R installed from the official CRAN repositories through apt package manager and the newest version of RStudio. My current ...
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2
answers
4k
views
What am i doing wrong in Conda?
I am a first time user of of Anaconda & Miniconda suite and I have been having problems running code using it. Every time I try to run a python script in Anaconda or miniconda it comes up with ...
user1198554
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1
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2k
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Matplotlib complains about not finding Qt platform plugin "wayland"
I have trouble getting Matplotlib to work on Ubuntu 21.04. Whenever I want to plot something I'm getting the following error message:
qt.qpa.plugin: Could not find the Qt platform plugin "wayland&...
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cannot install anaconda in ubuntu 20.04
I am trying to install anaconda. In my computer. I already had anaconda, but I uninstalled that, now again I am reinstalling it, but I am facing a weird error.
that:
subprocess.CalledProcessError: ...
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1
answer
457
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How to install Anacoda Navigator on Ubuntu 21.04?
I have shifted from Windows 10 yesterday and I wanted to install Anaconda Navigator as I am just gonna began my programming journey from python, Please guide me how to do it.
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227
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No option to maximize in Anaconda Navigator Window
I recently switched to Ubuntu from windows. When opening anaconda-navigator the application is opened as below. There is no maximize button available. Searched multiple sites but still don't ...
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1
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666
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I can't install packages with conda, even so anaconda was correctly installed? (Fresh Ubuntu 20.04 LTS Setup)
I wanted to install pandas on my fresh installation of Ubuntu 20.04 LTS (updated it first).
What i did:
I followed the installation instructions on:
https://docs.anaconda.com/anaconda/install/linux/
(...
0
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1
answer
3k
views
How to run my Python script with Anaconda environment in crontab?
I want to schedule a task with crontab to run a python file in a specific anaconda environment every day at a certain time. I have a python script to do so.
The python script runs if I just execute it ...
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706
views
Use "source" within 'script' command
I want to use the script command to see my output both in the command line and also store it at the same time, as suggested here.
Now, I can do in my command line:
script
source activate foo
python ...
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answer
129
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Troubleshooting KVM's guest anaconda installer logs
I am trying to install RHEL7.9 KVM guest on Ubuntu 18.04 Azure VM. The anaconda installer fails due to some error but the virt-viewer screen got closed so fast, I was unable to read what is the exact ...
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1
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5k
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Anaconda change 'base' environment permanently to a different environment 'myenv' to startup at terminal openings
I would like to change the base install environment that initiates when I start a terminal to a different environment that I have created called myenv anaconda environment.
I want myenv to start every ...
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2k
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Some confusion with conda / pip installations of PyQt5 on my Ubuntu 20.04
Context
I wanted to install PyQt5 in my conda base environment, along with some other libraries. I have completed this task in different sessions. The problem is that when I went in Visual Studio Code ...
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3k
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How to change the R path?
I have some problems with using R and Rstdio along with my Jupyter notebook and r in my ubuntu 20.04. I first installed R and Rstudio. This version of R was the latest. (4.0.5). Then I installed ...
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97
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conda install -c bioconda simlord | UnsatisfiedError
Following this tutorial and two installation steps, I want to run SimLoRD.
On Ubuntu 18.04, using a Python 3.9 venv:
conda install -c bioconda simlord
UnsatisfiedError
Terminal output
I have tried ...
0
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1
answer
52
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Anaconda Python
Hello I just wanted to ask that when I use my terminal to download anaconda python on the last step it automatically says no. Can anyone tell me what to do:
