Questions tagged [anaconda]

This tag should be used for questions regarding the Anaconda Python and R distribution.

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19 views

No option to maximize in Anaconda Navigator Window

I recently switched to Ubuntu from windows. When opening anaconda-navigator the application is opened as below. There is no maximize button available. Searched multiple sites but still don't ...
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10 views

Anaconda 3 / installed python possible incompatibility

I have installed anaconda3 trying to run a certain pipeline but I think I have run into incompatibility errors. For anaconda I created an enviroment with conda create -n name python=3.6 but it seems ...
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28 views

Anaconda-navigator GUI window is not maximized (on the right size) [closed]

I am using Ubuntu 20.04 LTS. I installed Anaconda Navigator but its window is not showing data on right side. How can I solve this?
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1answer
40 views

I can't install packages with conda, even so anaconda was correctly installed? (Fresh Ubuntu 20.04 LTS Setup)

I wanted to install pandas on my fresh installation of Ubuntu 20.04 LTS (updated it first). What i did: I followed the installation instructions on: https://docs.anaconda.com/anaconda/install/linux/ (...
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1answer
55 views

How to run my Python script with Anaconda environment in crontab?

I want to schedule a task with crontab to run a python file in a specific anaconda environment every day at a certain time. I have a python script to do so. The python script runs if I just execute it ...
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1answer
59 views

Use “source” within 'script' command

I want to use the script command to see my output both in the command line and also store it at the same time, as suggested here. Now, I can do in my command line: script source activate foo python ...
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12 views

Launching Anaconda more easily on 18.04

I'm fairly new with Ubuntus in general, and I was recommended 18.04 because of another project I'm working on. To launch Anaconda, I need to always open a terminal and type in source ~/anaconda3/bin/...
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1answer
32 views

Troubleshooting KVM's guest anaconda installer logs

I am trying to install RHEL7.9 KVM guest on Ubuntu 18.04 Azure VM. The anaconda installer fails due to some error but the virt-viewer screen got closed so fast, I was unable to read what is the exact ...
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1answer
55 views

Anaconda change 'base' environment permanently to a different environment 'myenv' to startup at terminal openings

I would like to change the base install environment that initiates when I start a terminal to a different environment that I have created called myenv anaconda environment. I want myenv to start every ...
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42 views

How do I get rid of this old numpy version that remains even after I uninstalled numpy in all possible ways?

I am using conda to manage my python packages. Running conda install numpy installs numpy 1.20. However, in my ~/anaconda3/lib/python3.8/site-packages/ directory, there is an old version of numpy (1....
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117 views

Some confusion with conda / pip installations of PyQt5 on my Ubuntu 20.04

Context I wanted to install PyQt5 in my conda base environment, along with some other libraries. I have completed this task in different sessions. The problem is that when I went in Visual Studio Code ...
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149 views

How to change the R path?

I have some problems with using R and Rstdio along with my Jupyter notebook and r in my ubuntu 20.04. I first installed R and Rstudio. This version of R was the latest. (4.0.5). Then I installed ...
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1answer
26 views

conda install -c bioconda simlord | UnsatisfiedError

Following this tutorial and two installation steps, I want to run SimLoRD. On Ubuntu 18.04, using a Python 3.9 venv: conda install -c bioconda simlord UnsatisfiedError Terminal output I have tried ...
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1answer
30 views

Anaconda Python

Hello I just wanted to ask that when I use my terminal to download anaconda python on the last step it automatically says no. Can anyone tell me what to do:
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58 views

anaconda environment in VS-Code can't find anaconda libraries

I am trying to run some python code with VS Code in an anaconda environment and I get an error: ImportError: libpython3.7m.so.1.0: cannot open shared object file: No such file or directory. my working ...
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45 views

Python - pymc and pymc3

Anyone have a solution for installing pymc or pymc3? I tried pip installing it in Jupiter Notebooks and installing it in the terminal "conda install -c conda-forge pymc3" ... but I'm still ...
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1answer
58 views

How to switch back and forth between Conda and Pyenv without restarting terminal?

I'm using both conda and pyenv and would like to switch between both while staying in the same terminal. The entries to initialize both in my .bashrc look as follows: # >>> conda initialize &...
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38 views

syntax error while installing anaconda for Windows Linux Subsystem

I have followed this guide for installing Anaconda: https://gist.github.com/kauffmanes/5e74916617f9993bc3479f401dfec7da After using wget to download Anaconda3-2020.11-Linux-x86_64.sh, I tried to ...
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1answer
35 views

Every time I open the terminal, it SAYS

bash: path-to-mcu-package: No such file or directory I tried checking with, source ~/.bashrc bash: path-to-mcu-package: No such file or directory Although,when I do cd ~ && ls -la, I see -rw-...
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123 views

Enable multi-line paste for conda python shell on 18.04

I am running ubuntu 18.04 and have started using conda 4.9.2 to set up python environments. As this is a remote machine, I often copy and paste short multi-line code snippets for development purposes. ...
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29 views

How to use Python “import gi” with conda

I saw the link [here][1] and I see how to use gi if I don't use conda. But I would like to use gi with a virtual environment. I tried conda install python-gi and pip install python-gi ``` but it say ...
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2answers
67 views

Installed unneeded dependencies [closed]

This is my first time using Ubuntu and I was doing well until I made this mistake. I can't tell if it's a big deal. While installing Anaconda, I accidentally ran this command to install the ...
1
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1answer
185 views

Conda libraries not loading in PyCharm

So, i can't seem to have PyCharm work correctly with Conda. I installed Anaconda following step by step the procedure on their site (download bash script, execute it). It is installed in ~/anaconda3, ...
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16 views

Impossible to activate a conda environment by shell script [duplicate]

I would like to activate a conda environment by a shell script, as suggested here, I have tried: #!/bin/bash -i source $(conda info --base)/etc/profile.d/conda.sh conda activate myenv but it doesn't ...
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1answer
86 views

Problems installing miniconda

I'm trying to install Miniconda in a Linux server. I don't have root/sudo access, so I'm using these steps: Download the Miniconda installer: wget https://repo.continuum.io/miniconda/Miniconda3-...
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13 views

Creating a local version of a cloud system and environments

Question: How do I make a local system that is very similar to a cloud system? For my use case, I want to be able to use locally all the same conda environments that are on the cloud. How do I copy ...
2
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1answer
590 views

Anaconda Navigator gets stuck at loading applications in Ubuntu 20.04 even after updating Anaconda Navigator

I tried opening Anaconda Navigator as root and it got stuck at "loading applications" and gave this error: Traceback (most recent call last): File "/home/karuna63/anaconda3/lib/...
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123 views

Issue install armadillo, is it cmake issue with anaconda3

While calling cmake . for installing armadillo I get warnings in addition to unwanted ARMA_HDF5_INCLUDE_DIR = /home/coyote/anaconda3/include (why does it always choose anaconda for this?). Warnings ...
2
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1answer
2k views

sh: 1: python: not found when execute python script from php

I'm tring to execute a python script call from php with the command below: $output = shell_exec('python /var/www/html/sna/server/userManagement.py '. $user.' '. $pass .' \''.$action.'\' 2>&1'); ...
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19 views

Ananconda and Ubuntu

What are some recommended resource on learning how to run the Anaconda packages with the terminal in Ubuntu ? ( I am new to python, new to programing, new to Ubuntu )
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193 views

Really REALLY want to install the same Enviroment of a laptop on my machine

I have a serious issue, which I'm going to address as fast as possible: I had a very old laptop, where I run a script related to a uni project. Laptop didn't close for ages, and now the battery died. ...
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270 views

What's the solution of anaconda installation in ubuntu 20.04 (fresh installed)

I've tried the following command after downloading the Anaconda installer. *** Notebook:~$ Downloads/Anaconda3-2020.07-Linux-x86_64.sh bash: Downloads/Anaconda3-2020.07-Linux-x86_64.sh: Permission ...
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0answers
70 views

Installing Ananconda on Ubuntu 20.04, many erros

Disclaimer: I'm very very new to Linux. Background: I'm having issues installing Anaconda on my Ubuntu 20.04. I am running this off of my USB stick on a PC. I tried downloading the community pycharm ...
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0answers
1k views

conda : command is not found

$ wget "https://repo.continuum.io/archive/Anaconda2-5.0.1-Linux-x86_64.sh" $ chmod u+x ./Anaconda2-5.0.1-Linux-x86_64.sh $ ./Anaconda2-5.0.1-Linux-x86_64.sh $ bash I ran the above commands ...
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0answers
44 views

Anaconda3 - spyder can't find 'system-externals'

from Anaconda-navigator, I launch 'spyder' - linked to 'Spyder4' and get the error starting the kernel. the message says to install 'spyder‑kernels', and i've tried both way, conda and pip, and ...
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217 views

Ubuntu20: nothing happens when I try to run Anaconda install script

I have downloaded the current version of Anaconda to my Downloads folder. In Terminal I CD’d to the folder and tried bash Anaconda3-2020.07-Linux-x86_64.sh Nothing happens except that a fresh prompt ...
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1answer
390 views

How do you get 'sudo' privilege for a program in a conda virtual environment?

As with the title, how can I run a program installed within a conda environment with sudo privileges? This thread(sudo: conda: command not found) mentioned that conda commands cannot be granted super ...
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0answers
126 views

Terminator & conda: Start Window in conda environment

I am sitting here and cannot believe why it is so hard to make a terminator window use a conda environment at startup AND keep open for further commands. I have tried different approaches but all lead ...
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1answer
2k views

No such file or directory: '/home/mona/anaconda3/lib/python3.7/site-packages/google_pasta-0.2.0.dist-info/METADATA'

How can I install tensorflow gpu 1.14 in Ubuntu 20.04? Using the following command I got the error (base) mona@mona:~$ pip install tensorflow-gpu==1.14 Collecting tensorflow-gpu==1.14 Downloading ...
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1k views

import tensorflow as tf Segmentation fault (core dumped) in Ubuntu 20.04

I need to install tensorflow 1.14 for DeepLabCut and I got a segmentation fault. How do I fix it? I also prefer to install the GPU version. Not sure if this is the most standard way of installing it. (...
1
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1answer
938 views

Permission denied error while using wget

I am trying to install Anaconda on WSL in the /mnt/c/Windows/System32 directory and use the following command: sudo wget https://repo.anaconda.com/archive/Anaconda3-2019.03-Linux-x86_64.sh However, I ...
2
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1answer
79 views

Messed up Python3.6 on Ubuntu 16.04

I installed anaconda and run 'sudo apt-get update && sudo apt-get dist-upgrade' on an Ubuntu 16.04 system. I upgraded pip inside an Anaconda environment and also used the 'sudo apt-get ...
1
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1answer
297 views

Silent Anaconda installation

I need to install Anaconda to the Docker container with Ubuntu. But after I copy and execute the installer it asks to agree with the license agreement. Is there any way to make a silent installation?
2
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0answers
509 views

Not able to activate conda environment through os.system command in python

I want to activate activate a conda environment before running my python file through os.system command, but unfortunately, I am not able to activate the conda environment. Following is the command I ...
1
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1answer
248 views

No indication of activated conda environment in terminal

Problem I have a local conda environment in a folder, but when I activate it, I get no indication of having done so. I know that it is activated because if I, as an example, try to remove it, it will ...
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1answer
438 views

Can't Activate Environment // Ubuntu // Conda

I downloaded Anaconda 3 on Ubuntu VM. The conda command wasn't working so I used this command: source ~/.bashrc but it didn't work. Then I tried this command: export PATH=~/anaconda3/bin:$PATH This ...
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1answer
424 views

Installing Anaconda on Ubuntu 20.04 [duplicate]

I am trying to install Anaconda on my Ubuntu 20.04. I downloaded the installer on the official site. Then I run the command: sudo ./Anaconda3-2020.02-Linux-x86_64.sh And followed the steps in the ...
2
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1answer
348 views

/usr/lib and Conda Environments

I am trying to understand the proper way to go about solving an issue. Background: I have Anaconda installed with the default python 3.7.7 Ubuntu 20.04 LTS I am trying to run a program with python ...
2
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2answers
2k views

How can I download and install miniconda?

I'm a brand new linux user, so please let me know if I'm missing something super obvious here. I'm using the newest release of ubuntu, 20 04. I've tried downloading miniconda from their website (...
1
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1answer
154 views

Firefox launches Anaconda Navigator

I'm running Firefox 75.0 and Anaconda3-2020.02 on Ubuntu Desktop 18.04 I've just installed Anaconda Navigator and created a launcher for it by following the accepted answer to this question. ...

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