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I want to move a system (all systems I am using are Ubuntu 16.04 based) from an unencrypted partition to a luks encrypted one (on the same disk).

To this end, I created a LUKS encrypted logical volume that contains a root and a swap partition. Then I copied the content of the existing partition to the new root partition using dd. I have checked that this new root contains the proper directory structure and performed a disk scan of the partition.

The plan was to chroot to the new system and to update grub from there.

In detail, I am trying the following (which is a combination from Ubuntu help pages and How to reinstall grub from a liveUSB if the / partition is encrypted and there is a separate /boot partition? ):

# Unlock crypto file system
sudo cryptsetup luksOpen /dev/sda2 lukslvm 

sudo vgscan 
sudo vgchange -ay
sudo svscan

# Mount root file system
sudo mount /dev/mapper/vgubuntu-root /mnt
# Mount boot filesystem
sudo mount /dev/sda1 /mnt/boot
# Mount required internal file systems
sudo mount -o rbind /dev /mnt/dev
sudo mount -t proc proc /mnt/proc
sudo mount -t sysfs sys /mnt/sys
## Additional LVM directories (for older systems)
sudo mount -o rbind /run/lvm /mnt/run/lvm
sudo mount -o rbind /run/lock/lvm /mnt/run/lock/lvm
# Enable DNS resolution
sudo cp /etc/resolv.conf /mnt/etc/resolv.conf
# Change to the encrypted system
sudo chroot /mnt /bin/bash

# Install required software
sudo apt-get install cryptsetup lvm2

# Edit /etc/crypttab
sudo printf "lukslvm\tUUID=%s\tnone\tluks\n" "$(cryptsetup luksUUID /dev/sda2)" | tee -a /etc/crypttab

# /etc/modules editieren
sudo echo "dm-crypt" >> /etc/modules

# Update kernel initramfs
sudo update-initramfs -u -k all

echo "Edit /etc/default/grub as GRUB_CMDLINE_LINUX_DEFAULT=\"kopt=root=/dev/mapper/vgubuntu-root\""
sudo vi /etc/default/grub

sudo update-grub

# Leave chroot environment
exit
# Write buffers to disk
sudo sync
# Unmount file systems
sudo umount /mnt/run/lvm
sudo umount /mnt/run/lock/lvm
sudo umount /mnt/sys
sudo umount /mnt/proc
sudo umount /mnt/boot
#
sudo swapoff -a

Unfortunately, it does not work out that way as update-grub does not seem to find the system installed on the encrypted partition. It only find the existing installation on a different partition /dev/sda3.

What am I missing?

1

I looks like you forgot to create a proper /etc/mtap file

sudo cp /proc/mounts /mnt/etc/mtab

See https://wiki.sabayon.org/index.php?title=HOWTO:_Restore_Grub2

  • Thanks. This alone does not seem to fix it, even though the root in /dev/mapper is definitely in the mtab file. – highsciguy Jun 2 '17 at 13:46
  • If you are booting into this device, do you see the grub startup screen? If not, try the grub-install /dev/sda – Simon Sudler Jun 2 '17 at 13:57
  • Yes. The grub installation works fine for the unencrypted partition. The installation on the encrypted partition is just not listed. – highsciguy Jun 2 '17 at 14:24
  • Could perhaps the problem be that the ubuntu installation on the encrypted partition resides on the same harddisk as the one that I am booting from? There is a Q&A that suggests this here: unix.stackexchange.com/questions/335247/… – highsciguy Jun 4 '17 at 19:16
  • I think the problem comes from the fact, that you are re-using the kernels in /dev/sda1 (aka /boot) for both root-filesystems (devmapper and /dev/sdaX). The grub script in /etc/grub.d/10_linux iterates in the function linux_entry() over the kernels found in /boot. I don’t how it behaves in your case… Try adding a “set -x” at the beginning of the linux_entry() function and check what is happening to your kernels. The “set -x” will generate huge amount of output. But without more details of the process, I don’t see how you can solve this issue. – Simon Sudler Jun 6 '17 at 7:42

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