During an automatic update on Ubuntu 16.04 LST with an update to Ubuntu 18.04 LST, I encountered and error which I have made worse by trying to fix.

To summarize I have a "boot drive" /sda1 with 3 partitions
Partition 1 512 FAT32 EFI system
Partition 2 512 Ext1 BIOS Bootable
Partition 3 959G Linux LVM - this contain the main HD and swap area

FYI, while I can "see" these partition on the Disk utility, I get nothing in the terminal when I type vgscan.

I have managed to destroy the BIOS Bootable - so that is blank and available When I currently boot, it appears to use the EFI and boot into grub, which if I knew what to do next may be fine.

I am currently booted off a USB flash drive Ubuntu 18.04 installation disk. When attempt to use the "Install Ubuntu App" click the "something else" since I just want to update not do a clean install and loose and data.

On the next page I am present wit the options of /dev/sda1 through dev/sda3, as partitions per above. I have tried several combinations and a warning that I need to increase a partition size to 4.9 gbytes.

So I need to set up the system so that it boots and mounts the LVM partition.

Thanks in advance


Addendum: It appears that the fstab and grub.cfg are mess up. Below is additional information that may be of use:

# /etc/fstab: static file system information.  
# Use 'blkid' to print the universally unique identifier for a  
# device; this may be used with UUID= as a more robust way to name devices  
# that works even if disks are added and removed. See fstab(5).  
# / was on /dev/sda2 during installation  
UUID=3653100d-6690-4456-a6b9-13299060ad33 /               ext2    errors=remount-ro 0       1  
# /boot/efi was on /dev/sda1 during installation  
UUID=4CA2-4106  /boot/efi       vfat    umask=0077      0       1  

from the terminal:

root@ubuntu:~# blkid  
/dev/sda1: UUID="4CA2-4106" TYPE="vfat" PARTUUID="11a0c394-c5cd-47e1-a04a-82d581a5f507"    
/dev/sda2: UUID="3653100d-6690-4456-a6b9-13299060ad33" TYPE="ext2"   PARTUUID="3fc12e58-b028-4a45-976b-29ba68e01ba1"  
/dev/sdb1: LABEL="Alice" UUID="d661c71a-1931-44a2-91ec-92997fea6abe"   TYPE="ext4" PARTUUID="26d7b187-8019-4b5b-afa4-ac864b2fb772"  
/dev/sdc1: LABEL="UBUNTU 18_0" UUID="1DE3-3A5E" TYPE="vfat" PARTUUID="0298be7f-01"  
/dev/loop0: TYPE="squashfs"  
/dev/loop1: TYPE="squashfs"  
/dev/loop2: TYPE="squashfs"  
/dev/loop3: TYPE="squashfs"  
/dev/loop4: TYPE="squashfs"  
/dev/loop5: TYPE="squashfs"  
/dev/loop6: TYPE="squashfs"  
/dev/loop7: TYPE="squashfs"  
/dev/sda3: PARTUUID="18ec3457-3f3e-4235-984f-390c89b388bc"

The volumes mounted using mount | grep "/dev/s" are

/dev/sdc1 /cdrom vfat   ro,noatime,fmask=0022,dmask=0022,codepage=437,iocharset=iso8859-1,shortname=mixed,errors=remount-ro 0 0   
tmpfs /dev/shm tmpfs rw,nosuid,nodev 0 0  
/dev/sda1 /media/ubuntu/4CA2-4106 vfat   rw,nosuid,nodev,relatime,uid=999,gid=999,fmask=0022,dmask=0022,codepage=437,iocharset=iso8859-1,shortname=mixed,showexec,utf8,flush,errors=remount-ro 0 0  
/dev/sda2 /media/ubuntu/3653100d-6690-4456-a6b9-13299060ad33 ext2   rw,nosuid,nodev,relatime,block_validity,barrier,user_xattr,acl,stripe=4 0 0  
/dev/sdb1 /media/ubuntu/Alice ext4 rw,nosuid,nodev,relatime,data=ordered 0 0
root@ubuntu:/media/ubuntu/3653100d-6690-4456-a6b9-13299060ad33/etc# mount | grep "/dev/s"  
/dev/sdc1 on /cdrom type vfat (ro,noatime,fmask=0022,dmask=0022,codepage=437,iocharset=iso8859-1,shortname=mixed,errors=remount-ro)  
tmpfs on /dev/shm type tmpfs (rw,nosuid,nodev)  
/dev/sda1 on /media/ubuntu/4CA2-4106 type vfat (rw,nosuid,nodev,relatime,uid=999,gid=999,fmask=0022,dmask=0022,codepage=437,iocharset=iso8859-1,shortname=mixed,showexec,utf8,flush,errors=remount-ro,uhelper=udisks2)  
/dev/sda2 on /media/ubuntu/3653100d-6690-4456-a6b9-13299060ad33 type ext2 (rw,nosuid,nodev,relatime,block_validity,barrier,user_xattr,acl,stripe=4,uhelper=udisks2)  
/dev/sdb1 on /media/ubuntu/Alice type ext4 (rw,nosuid,nodev,relatime,data=ordered,uhelper=udisks2)

I cannot see the volume group using lvdisplay

So I either need a means of editing the fstab file to mount the LVM volume (which I have not found yet, I don't see a UUID for one) or I need an application that can open and read a LVM partition that runs either in Ubuntu, Windows 10 or Mac OS; the latter 2 being I pull the drive and copy it at home.)

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