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I tried to use lm-sensors and fancontrol as explained in this question, but pwmcontrol tells me that no pwm-control sensor modules are available.

This Reddit thread seems to indicate that it is not trivial/possible to do it, but does anyone as an update on it?

The Windows application allows me to control the fans without problem.

# lshw -C system
description: Desktop Computer
product: Z390 AORUS MASTER (Default string)
vendor: Gigabyte Technology Co., Ltd.
version: Default string
serial: Default string
width: 64 bits
capabilities: smbios-3.1 dmi-3.1 smp vsyscall32
configuration: boot=normal chassis=desktop family=Default string sku=Default string uuid=E002D503-5E04-AB05-E206-3E0700080009
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In latest motherboards you can manage fans in BIOS. If you can't find fan control in BIOS, take a look at firmare updates for your MB.

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