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install libhdf5-dev add patch to libhdf5 in Makefile.config. example: INCLUDE_DIRS := $(PYTHON_INCLUDE) /usr/local/include /usr/include/hdf5/serial/


The following solution works only for multiple files at once and not for new images. But to do this, I believe, you have to change the source code of ImageJ. Create an additionally private desktop file imagej.desktop. cp /usr/share/applications/imagej.desktop ~/.local/share/applications sudo chown $USER:$USER ~/.local/share/applications/imagej.desktop ...

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