R is a free, open-source programming language and software environment for statistical computing, bioinformatics, and graphics.

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1answer
36 views

Install vegan package for R via terminal command

Hi I want to install the vegan package for R via terminal command - so far I have this: This downloads the zipped file required (this part works) wget -O ~/file/downloads/vegan_2.3-5.tar.gz ...
2
votes
2answers
43 views

status of gedit r plugin (rgedit) in 16.04?

People are going to great lengths to get the gedit R plugin back by downgrading gedit. I tried, but couldn't make those instructions work. Mostly now I'm sad. RStudio is shiny and everything, but ...
0
votes
0answers
46 views

Update R version 3.0.2 to 3.3.0

I am using R version 3.0.2 in Ubuntu 14.04 LTS. I want to update latest version of R. Can anyone help me to do update?
1
vote
1answer
38 views

Can't install latest version of R on ARM Chromebook

So I'm running Ubuntu 14.04 through Crouton, and every time I install R it only installs v3.0.2. I've tried reinstalling it, using PPA, and other things but nothing's worked so far.
0
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0answers
22 views

problem about reinstallation of R

I was using R 3.1.1 but since the dplyr was not working with this version I decided to upgrade, but I messed it up so i removed R: sudo apt-get --purge remove r-base-core but now when I try to ...
1
vote
1answer
60 views

install RStudio 0.99.896 on 14.04 ubuntu 'rstudio-server' already exists

I wanted to update RStudio, I uninstalled the version I had and followed these commands to install the newest version. $ sudo apt-get install gdebi-core $ wget ...
0
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0answers
31 views

How do I enable global menu for RStudio in 16.04?

I tried the solutions mentioned in this question but neither worked. RStudio version 0.99.896 on Ubuntu 16.04.
0
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2answers
74 views

“Package dependencies cannot be resolved” - R project

I use R statistics ("r-base") on my computer and recently, by mistake, I ran the following command in terminal: sudo apt-get remove r-base-core Of course this removed R from my computer. To undo ...
1
vote
2answers
543 views

Cannot install curl-config in Ubuntu 12.04

When trying to install the R package RCurl I get the following error: checking for curl-config... no Cannot find curl-config ERROR: configuration failed for package ‘RCurl’ Yet, curl-config exists ...
0
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0answers
11 views

R script cannot run on Ubuntu

I have an rhtml, which I would like to use on an Ubuntu server. I think, it cannot interpret my code, it gives output like this in browser: range<-max2-abs(min2) m[i,j]<-range } else{ ...
1
vote
1answer
5k views

Setting up the proxy for rstudio

My machine is running on Ubuntu 14.04, and I have already tried looking at Configuring R to Use an HTTP Proxy in the FAQ section of Rstudio support. This is what I did till now... in my home ...
1
vote
1answer
154 views

Install readr in R and met dirty dependency tree

My Ubuntu and R versions: alvas@ubi:~$ lsb_release -a No LSB modules are available. Distributor ID: Ubuntu Description: Ubuntu 14.04.2 LTS Release: 14.04 Codename: trusty alvas@ubi:~$ R > ...
1
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0answers
40 views

Bash script to display XKCD comic - crontab not executing

I wrote a bash script to display the current xkcd comic in my web browser (using the RXKCD package in R). I want to schedule this so that the current xkcd comic displays every morning at 8am when I ...
0
votes
0answers
35 views

Trying to install R generates unmet dependencies in Ubuntu 14.04

I've followed the instalation of R (first r-base) as I always did - adding mirror, genereate the correct key, then sudo apt-get update and sudo apt-get install. But now I'm getting unmet dependencies ...
0
votes
0answers
48 views

Upgrade R on Kubuntu 14.4 LTS

How can I upgrade my R installation on Kubuntu 14.4 LTS from 3.0.2 to the current 3.2.4? Something like sudo su echo "deb http://www.stats.bris.ac.uk/R/bin/linux/ubuntu trusty/" >> ...
2
votes
2answers
2k views

How to install R version 3.2.1 – collect2: error: ld returned 1 exit status

I'm trying to install R version 3.2.1. I executed the following code ./configure --enable-R-shlib followed by make command. But the following error is obtained. /usr/bin/ld: ../appl/dchdc.o: ...
0
votes
2answers
41 views

Change default editor for .cpp files

When I double click .cpp files I expect gedit to open it, instead RStudio opens it. How to set gedit as the default editor for .cpp files?
1
vote
0answers
41 views

Error while installing R's chron package

I am running R in ubuntu 14.04. Trying to install the package "chron" I get the following message: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector ...
3
votes
1answer
174 views

Trying to install R cmdr I get an unexpected error message. What's wrong?

The terminal states: Error in .chooseMirror(m, "CRAN", graphics, ind, useHTTPS) : could not find function "setNames" How do I fix this?
1
vote
1answer
338 views

Problem in installing packages in R

In R, I am trying to run - install.package('rattle') but terminal gives me following error - Error in .chooseMirror(m, "CRAN", graphics, ind, useHTTPS) : could not find function "setNames" R ...
17
votes
4answers
54k views

Installing latest version of R-base

I have been unsuccessfully trying to install the latest version (2.15.2) of r-base. Apparently, R package Rcpp would not install for R version 2.14.1 - the version that installs for me. I am not ...
0
votes
1answer
74 views

Shiny server systemctl fails at boot

I installed Shiny Server on my Ubuntu Mate 15.10 64bit. I can start the server without problem after boot by running manually the command sudo systemctl start shiny-server. I enabled the service to ...
0
votes
1answer
100 views

Compiling R - configure: error: cannot run C compiled programs while installing R-3.0.0

Compiling R root@rani:/media/626CAD/androidnetbeans/R-3.0.0# sudo bash ./configure checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu loading site script ...
0
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0answers
284 views

installation of package ‘igraph’ had non-zero exit status

install.packages("igraph") Installing package(s) into ‘/usr/local/lib/R/site-library’ (as ‘lib’ is unspecified) --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... ...
1
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0answers
39 views

RStudio on Ubuntu (GNOME): settings reset on launch

I have a HiDpi screen, and require the zoom setting to be at 200% within RStudio for it to be usable. Each time I launch the application from the launcher, however, the zoom setting is reset back to ...
0
votes
0answers
116 views

How to set proxy settings for R so that i can update the packages in R?

I am using ubuntu 14.04.03 LTS(32-bit) and have R version 3.2.2 installed. I didn't remember either I have installed my R package as root or as normla user. Whenever I want to update/install any ...
1
vote
2answers
513 views

Can't install R with sudo apt-get install r-base

When I try to install R with sudo apt-get install r-base, it says Reading package lists... Done Building dependency tree Reading state information... Done Some packages could not be installed. ...
0
votes
1answer
61 views

CRLfile: none??? Trying to update R to latest version been googling for days

Ubuntu 14.04 I get an error after sudo apt-get update ###other stuff### Err https://cran.mtu.edu trusty/ Packages server certificate verification failed. CAfile: ...
12
votes
5answers
11k views

How to install rgdal on Ubuntu 12.10?

I'm strugling to install rgdal library on Ubuntu 12.10. Installation from within R results in error: Error: gdal-config not found The gdal-config script distributed with GDAL could not be ...
1
vote
1answer
3k views

libjvm.so: cannot open shared object file: No such file or directory

Trying to install the rJava package on R, on my 14.10 ubuntu, using this code if (!require(rJava)) install.packages('rJava') got few errors related to java including jni problems, after ...
0
votes
0answers
53 views

Multiple R installations… lost overview

I am running Ubuntu 14 and I am using R and R studio. I think the installation is at: /usr/bin/R Recently, I wanted to use the Jupyter Notebook to also run R in this kind of notebook in the ...
-1
votes
1answer
463 views

Availability of R-base 3.2.3 availability

When will R-base for 3.2.3 (wooden-Christmas-tree) be available in the CRAN ubuntu directories?
0
votes
1answer
322 views

RStudio keeps crashing

My RStudio keeps crashing and its very annoying any help in fixing it will be much appreciated. lsb_release -a No LSB modules are available. Distributor ID: Ubuntu Description: Ubuntu 14.04.3 ...
0
votes
1answer
198 views

Error while updating R in ubuntu 14.04 trusty

I am trying to install R programming language and able to install rbase using this code sudo apt-get install r-base After that i tried to upgrade it using this code sudo add-apt-repository ‘deb ...
0
votes
1answer
26k views

unable to load shared object wrong ELF class: ELFCLASS32

I have a linux server with x86_64. I'm compiling an R code that needs to load a bibliblioteca. When I run this code it displays the following error has Error in dyn.load ("functions.so"): Unable to ...
0
votes
1answer
75 views

Removing R libraries in protected /usr/ paths

I am familiar with Unix as an operating system, but not in the general logic of how developers decide to organize application library locations. Take R, for example. Installing R on ubuntu can be ...
2
votes
1answer
374 views

Setting system-wide environment variable using /etc/environment

I want to add to my PATH so that my computer (Ubuntu) knows where to interpret the "R" command (for launching R). I need this so a Terminal or RStudio can find where I installed R. I did all of the ...
1
vote
1answer
42 views

Installing R and getting error

I am getting this error when installing R and did not get it before(was able to download it before but not anymore) I would appreciate any help as I am new to Ubuntu. Failed to fetch ...
1
vote
1answer
31 views

Installing Revolution Analytics broke R and I can't fix it

So I installed (and quickly un-installed Revolution analytics's RRO with MKL) following their instructions (e.g. using the .deb and removing using dpkg). Now, I want to use the default/standard R ...
5
votes
2answers
8k views

Once installed geos library (C++, and C), and then trying to install rgeos package (R), it reports geos-config missing!

Knowing that the package rgeos, from the R language, requieres a prior installation of geos libraries, I installed, both, libgeos and libgeos-c1 (3.2.2), using the synaptic installer in my Ubuntu ...
5
votes
1answer
154 views

Make terminal windows always active (not on top)

I created a small program in R where every picture of a folder will pop up (X11) and then I have to provide an input to the terminal before showing the next one. The problem is that every time a ...
1
vote
0answers
959 views

R - Warning: unable to access index for repository

Here is my OS details: $ uname -a Linux starbuck 3.2.0-92-generic #131-Ubuntu SMP Tue Oct 20 16:16:02 UTC 2015 x86_64 x86_64 x86_64 GNU/Linux Here is my R version: $ R --version R version 3.2.2 ...
0
votes
1answer
204 views

Installing r-packages in RStudio with proxy

I am using: Ubuntu 15.04 RStudio 0.99.486. R 3.1.2 proxy network with authentication The problem occurs when I open RStudio and try to install any package. Example: install.packages("ggplot2") ...
1
vote
1answer
136 views

R/Shiny WebApp logs, running in shell (Ubuntu crontab)

I'm running, using crontab, an R/Shiny WebApp. The crontab expression looks like this: @reboot R -e 'shiny::runApp(...)' | tee /var/log/shiny-server.log I've also tried @reboot R -e ...
0
votes
1answer
272 views

Configure installation of R in ubuntu

How can I install R in ubuntu with non default flags? For example, for debugging, I would like to build R with the -fsanitize=address option. How to do that?
0
votes
1answer
319 views

Trying to upgrade R, error message refers to 'unmet dependencies'

I tried following the directions in this post Installing latest version of R-base after several simpler techniques failed to upgrade my R (which is stuck on 3.0.2). Everything seems to have worked ...
0
votes
0answers
174 views

Unmet Dependencies of libc6 : Depends: libgcc1 but it is not going to be installed

Do you want to continue? [Y/n] y E: Cannot get debconf version. Is debconf installed? debconf: apt-extracttemplates failed: No such file or directory dpkg: dependency problems prevent configuration ...
1
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0answers
106 views

OpenGL sources: Libglu1-mesa-dev depends on libglu1-mesa (= 8.0.2-0ubuntu3) but 8.0.4-0ubuntu0.7 is to be installed

When trying to install an R package (rgl, which makes 3-D plots), R gives the following error: configure: error: missing required header GL/glu.h ERROR: configuration failed for package ‘rgl’ ...
0
votes
1answer
406 views

How to install R package in ubuntu 14.04.03?

As per the documentation given on the page http://ftp.iitm.ac.in/cran/ I tried to install the latest R package v3.2.2 on my system(32-bit). I have added deb http://cran.rstudio.com/ubuntu trusty/ ...
0
votes
0answers
630 views

package ‘tm.plugin.tags’ is not available (for R version 3.2.2) ubuntu 12.04

How to solve the issue? Full error is given below: install.packages("tm.plugin.webmining") Installing package into ‘/home/t328/R/x86_64-pc-linux-gnu-library/3.2’ (as ‘lib’ is unspecified) Warning: ...