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So when I open a terminal (ctrl+alt+t) it takes about 6 seconds to the prompt to show, and I can observe (running top on another terminal) that it is taking 99% of the CPU to do that.

What can be causing that? It loaded instantly before.

I'm running Ubuntu 13.04, my CPU is an Intel core i7-2600K @ 3.4GHz and I have 16GB of RAM.

~/.profile:

# ~/.profile: executed by the command interpreter for login shells.
# This file is not read by bash(1), if ~/.bash_profile or ~/.bash_login
# exists.
# see /usr/share/doc/bash/examples/startup-files for examples.
# the files are located in the bash-doc package.

# the default umask is set in /etc/profile; for setting the umask
# for ssh logins, install and configure the libpam-umask package.
#umask 022

# if running bash
if [ -n "$BASH_VERSION" ]; then
    # include .bashrc if it exists
    if [ -f "$HOME/.bashrc" ]; then
    . "$HOME/.bashrc"
    fi
fi

# set PATH so it includes user's private bin if it exists
if [ -d "$HOME/bin" ] ; then
    PATH="$HOME/bin:$PATH"
fi


export PATH=/usr/local/cuda-5.0/bin:$PATH

export LD_LIBRARY_PATH=/usr/local/cuda-5.0/lib:/usr/local/cuda-5.0/lib64:$LD_LIBRARY_PATH

export PS1="\e[0;31m[\u@\h \W]\$ \e[m"

~/bashrc:

# ~/.bashrc: executed by bash(1) for non-login shells.
# see /usr/share/doc/bash/examples/startup-files (in the package bash-doc)
# for examples

# If not running interactively, don't do anything
[ -z "$PS1" ] && return

# don't put duplicate lines or lines starting with space in the history.
# See bash(1) for more options
HISTCONTROL=ignoreboth

# append to the history file, don't overwrite it
shopt -s histappend

# for setting history length see HISTSIZE and HISTFILESIZE in bash(1)
HISTSIZE=1000
HISTFILESIZE=2000

# check the window size after each command and, if necessary,
# update the values of LINES and COLUMNS.
shopt -s checkwinsize

# If set, the pattern "**" used in a pathname expansion context will
# match all files and zero or more directories and subdirectories.
#shopt -s globstar

# make less more friendly for non-text input files, see lesspipe(1)
[ -x /usr/bin/lesspipe ] && eval "$(SHELL=/bin/sh lesspipe)"

# set variable identifying the chroot you work in (used in the prompt below)
if [ -z "$debian_chroot" ] && [ -r /etc/debian_chroot ]; then
    debian_chroot=$(cat /etc/debian_chroot)
fi

# set a fancy prompt (non-color, unless we know we "want" color)
case "$TERM" in
    xterm-color) color_prompt=yes;;
esac

# uncomment for a colored prompt, if the terminal has the capability; turned
# off by default to not distract the user: the focus in a terminal window
# should be on the output of commands, not on the prompt
force_color_prompt=yes

if [ -n "$force_color_prompt" ]; then
    if [ -x /usr/bin/tput ] && tput setaf 1 >&/dev/null; then
    # We have color support; assume it's compliant with Ecma-48
    # (ISO/IEC-6429). (Lack of such support is extremely rare, and such
    # a case would tend to support setf rather than setaf.)
    color_prompt=yes
    else
    color_prompt=
    fi
fi

if [ "$color_prompt" = yes ]; then
    PS1='${debian_chroot:+($debian_chroot)}\[\033[01;32m\]\u@\h\[\033[00m\]:\[\033[01;34m\]\w\[\033[00m\]\$ '
else
    PS1='${debian_chroot:+($debian_chroot)}\u@\h:\w\$ '
fi
unset color_prompt force_color_prompt

# If this is an xterm set the title to user@host:dir
case "$TERM" in
xterm*|rxvt*)
    PS1="\[\e]0;${debian_chroot:+($debian_chroot)}\u@\h: \w\a\]$PS1"
    ;;
*)
    ;;
esac

# enable color support of ls and also add handy aliases
if [ -x /usr/bin/dircolors ]; then
    test -r ~/.dircolors && eval "$(dircolors -b ~/.dircolors)" || eval "$(dircolors -b)"
    alias ls='ls --color=auto'
    #alias dir='dir --color=auto'
    #alias vdir='vdir --color=auto'

    alias grep='grep --color=auto'
    alias fgrep='fgrep --color=auto'
    alias egrep='egrep --color=auto'
fi

# some more ls aliases
alias ll='ls -alF'
alias la='ls -A'
alias l='ls -CF'

# Add an "alert" alias for long running commands.  Use like so:
#   sleep 10; alert
alias alert='notify-send --urgency=low -i "$([ $? = 0 ] && echo terminal || echo error)" "$(history|tail -n1|sed -e '\''s/^\s*[0-9]\+\s*//;s/[;&|]\s*alert$//'\'')"'

# Alias definitions.
# You may want to put all your additions into a separate file like
# ~/.bash_aliases, instead of adding them here directly.
# See /usr/share/doc/bash-doc/examples in the bash-doc package.

if [ -f ~/.bash_aliases ]; then
    . ~/.bash_aliases
fi

# enable programmable completion features (you don't need to enable
# this, if it's already enabled in /etc/bash.bashrc and /etc/profile
# sources /etc/bash.bashrc).
if [ -f /etc/bash_completion ] && ! shopt -oq posix; then
    . /etc/bash_completion
fi

export PATH=$PATH:/usr/local/cuda-5.0/bin
export LD_LIBRARY_PATH=/usr/local/cuda-5.0/lib64:/lib
export PATH=$PATH:~/bin

bash -v output:

# System-wide .bashrc file for interactive bash(1) shells.

# To enable the settings / commands in this file for login shells as well,
# this file has to be sourced in /etc/profile.

# If not running interactively, don't do anything
[ -z "$PS1" ] && return

# check the window size after each command and, if necessary,
# update the values of LINES and COLUMNS.
shopt -s checkwinsize

# set variable identifying the chroot you work in (used in the prompt below)
if [ -z "${debian_chroot:-}" ] && [ -r /etc/debian_chroot ]; then
    debian_chroot=$(cat /etc/debian_chroot)
fi

# set a fancy prompt (non-color, overwrite the one in /etc/profile)
PS1='${debian_chroot:+($debian_chroot)}\u@\h:\w\$ '

# Commented out, don't overwrite xterm -T "title" -n "icontitle" by default.
# If this is an xterm set the title to user@host:dir
#case "$TERM" in
#xterm*|rxvt*)
#    PROMPT_COMMAND='echo -ne "\033]0;${USER}@${HOSTNAME}: ${PWD}\007"'
#    ;;
#*)
#    ;;
#esac

# enable bash completion in interactive shells
#if ! shopt -oq posix; then
#  if [ -f /usr/share/bash-completion/bash_completion ]; then
#    . /usr/share/bash-completion/bash_completion
#  elif [ -f /etc/bash_completion ]; then
#    . /etc/bash_completion
#  fi
#fi

# sudo hint
if [ ! -e "$HOME/.sudo_as_admin_successful" ] && [ ! -e "$HOME/.hushlogin" ] ; then
    case " $(groups) " in *\ admin\ *)
    if [ -x /usr/bin/sudo ]; then
    cat <<-EOF
    To run a command as administrator (user "root"), use "sudo <command>".
    See "man sudo_root" for details.

    EOF
    fi
    esac
fi
groups) "
groups) 
groups

# if the command-not-found package is installed, use it
if [ -x /usr/lib/command-not-found -o -x /usr/share/command-not-found/command-not-found ]; then
    function command_not_found_handle {
            # check because c-n-f could've been removed in the meantime
                if [ -x /usr/lib/command-not-found ]; then
           /usr/lib/command-not-found -- "$1"
                   return $?
                elif [ -x /usr/share/command-not-found/command-not-found ]; then
           /usr/share/command-not-found/command-not-found -- "$1"
                   return $?
        else
           printf "%s: command not found\n" "$1" >&2
           return 127
        fi
    }
fi
# ~/.bashrc: executed by bash(1) for non-login shells.
# see /usr/share/doc/bash/examples/startup-files (in the package bash-doc)
# for examples

# If not running interactively, don't do anything
[ -z "$PS1" ] && return

# don't put duplicate lines or lines starting with space in the history.
# See bash(1) for more options
HISTCONTROL=ignoreboth

# append to the history file, don't overwrite it
shopt -s histappend

# for setting history length see HISTSIZE and HISTFILESIZE in bash(1)
HISTSIZE=1000
HISTFILESIZE=2000

# check the window size after each command and, if necessary,
# update the values of LINES and COLUMNS.
shopt -s checkwinsize

# If set, the pattern "**" used in a pathname expansion context will
# match all files and zero or more directories and subdirectories.
#shopt -s globstar

# make less more friendly for non-text input files, see lesspipe(1)
[ -x /usr/bin/lesspipe ] && eval "$(SHELL=/bin/sh lesspipe)"
SHELL=/bin/sh lesspipe)"
SHELL=/bin/sh lesspipe)
SHELL=/bin/sh lesspipe
export LESSOPEN="| /usr/bin/lesspipe %s";
export LESSCLOSE="/usr/bin/lesspipe %s %s";

# set variable identifying the chroot you work in (used in the prompt below)
if [ -z "$debian_chroot" ] && [ -r /etc/debian_chroot ]; then
    debian_chroot=$(cat /etc/debian_chroot)
fi

# set a fancy prompt (non-color, unless we know we "want" color)
case "$TERM" in
    xterm-color) color_prompt=yes;;
esac

# uncomment for a colored prompt, if the terminal has the capability; turned
# off by default to not distract the user: the focus in a terminal window
# should be on the output of commands, not on the prompt
force_color_prompt=yes

if [ -n "$force_color_prompt" ]; then
    if [ -x /usr/bin/tput ] && tput setaf 1 >&/dev/null; then
    # We have color support; assume it's compliant with Ecma-48
    # (ISO/IEC-6429). (Lack of such support is extremely rare, and such
    # a case would tend to support setf rather than setaf.)
    color_prompt=yes
    else
    color_prompt=
    fi
fi

if [ "$color_prompt" = yes ]; then
    PS1='${debian_chroot:+($debian_chroot)}\[\033[01;32m\]\u@\h\[\033[00m\]:\[\033[01;34m\]\w\[\033[00m\]\$ '
else
    PS1='${debian_chroot:+($debian_chroot)}\u@\h:\w\$ '
fi
unset color_prompt force_color_prompt

# If this is an xterm set the title to user@host:dir
case "$TERM" in
xterm*|rxvt*)
    PS1="\[\e]0;${debian_chroot:+($debian_chroot)}\u@\h: \w\a\]$PS1"
    ;;
*)
    ;;
esac

# enable color support of ls and also add handy aliases
if [ -x /usr/bin/dircolors ]; then
    test -r ~/.dircolors && eval "$(dircolors -b ~/.dircolors)" || eval "$(dircolors -b)"
    alias ls='ls --color=auto'
    #alias dir='dir --color=auto'
    #alias vdir='vdir --color=auto'

    alias grep='grep --color=auto'
    alias fgrep='fgrep --color=auto'
    alias egrep='egrep --color=auto'
fi
dircolors -b)"
dircolors -b)
dircolors -b
LS_COLORS='rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.webm=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=00;36:*.au=00;36:*.flac=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:*.axa=00;36:*.oga=00;36:*.spx=00;36:*.xspf=00;36:';
export LS_COLORS

# some more ls aliases
alias ll='ls -alF'
alias la='ls -A'
alias l='ls -CF'

# Add an "alert" alias for long running commands.  Use like so:
#   sleep 10; alert
alias alert='notify-send --urgency=low -i "$([ $? = 0 ] && echo terminal || echo error)" "$(history|tail -n1|sed -e '\''s/^\s*[0-9]\+\s*//;s/[;&|]\s*alert$//'\'')"'

# Alias definitions.
# You may want to put all your additions into a separate file like
# ~/.bash_aliases, instead of adding them here directly.
# See /usr/share/doc/bash-doc/examples in the bash-doc package.

if [ -f ~/.bash_aliases ]; then
    . ~/.bash_aliases
fi

# enable programmable completion features (you don't need to enable
# this, if it's already enabled in /etc/bash.bashrc and /etc/profile
# sources /etc/bash.bashrc).
if [ -f /etc/bash_completion ] && ! shopt -oq posix; then
    . /etc/bash_completion
fi
. /usr/share/bash-completion/bash_completion
#                                                          -*- shell-script -*-
#
#   bash_completion - programmable completion functions for bash 4.1+
#
#   Copyright © 2006-2008, Ian Macdonald <ian@caliban.org>
#             © 2009-2011, Bash Completion Maintainers
#                     <bash-completion-devel@lists.alioth.debian.org>
#
#   This program is free software; you can redistribute it and/or modify
#   it under the terms of the GNU General Public License as published by
#   the Free Software Foundation; either version 2, or (at your option)
#   any later version.
#
#   This program is distributed in the hope that it will be useful,
#   but WITHOUT ANY WARRANTY; without even the implied warranty of
#   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
#   GNU General Public License for more details.
#
#   You should have received a copy of the GNU General Public License
#   along with this program; if not, write to the Free Software Foundation,
#   Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
#
#   The latest version of this software can be obtained here:
#
#   http://bash-completion.alioth.debian.org/
#
#   RELEASE: 1.99

if [[ $- == *v* ]]; then
    BASH_COMPLETION_ORIGINAL_V_VALUE="-v"
else
    BASH_COMPLETION_ORIGINAL_V_VALUE="+v"
fi

if [[ ${BASH_COMPLETION_DEBUG-} ]]; then
    set -v
else
    set +v
fi
unset BASH_COMPLETION_ORIGINAL_V_VALUE

# ex: ts=4 sw=4 et filetype=sh

export PATH=$PATH:/usr/local/cuda-5.0/bin
export LD_LIBRARY_PATH=/usr/local/cuda-5.0/lib64:/lib
export PATH=$PATH:~/bin

When I run the command suggested by geirha the output stops a couple of seconds in the following lines, I don't know if they point to the problem.

+ /home/miguel/.bashrc:10:HISTCONTROL=ignoreboth
+ /home/miguel/.bashrc:13:shopt -s histappend
+ /home/miguel/.bashrc:16:HISTSIZE=1000
+ /home/miguel/.bashrc:17:HISTFILESIZE=2000
share|improve this question
1  
Add the contents of ~/.profile and ~/.bashrc to the question. –  edwin Aug 31 '13 at 0:24
    
I added the cuda lines a long time ago and there was no problems. –  Msegade Aug 31 '13 at 0:41
1  
What if you run bash from within bash, does it take so long for the second bash to load? –  Steven Kath Aug 31 '13 at 0:53
    
Yes, the same amount of time. –  Msegade Aug 31 '13 at 0:54
1  
What happens if you run bash --noprofile? Also, try starting it with bash -v for a verbose output of the initialization process. –  edwin Aug 31 '13 at 1:08
show 5 more comments

1 Answer 1

Most likely, it's bash-completion that takes time to load. Try commenting out the section that sources /etc/bash-completion.

#if [ -f /etc/bash_completion ] && ! shopt -oq posix; then
#    . /etc/bash_completion
#fi

And see if you get a speed-up. I've commented it out myself too due to the ammount of time it takes to load. Without it, you just get the default completion, which is mainly filename completion. What bash-completion adds is completion for things like package names when you type e.g. apt-get install foo<tab>.

If you want to see everything that happens when bash is started in interactive (non-login) mode, try:

PS4='+ $BASH_SOURCE:$LINENO:' bash -xic ''

EDIT

Based on the additional information provided in the question and the question's comments, it turned out the real problem was that the history file had some gigantic lines, which took time for bash to read and parse. So the solution in that case is to either truncate the file

> "$HISTFILE"

or manually edit it and remove the gigantic lines.

share|improve this answer
    
I couldn' find the lines that you listed above about bash-completion. In my /etc/bash_completion file there is the following line: . /usr/share/bash-completion/bash_completion and in this file I didn't find those lines. –  Msegade Aug 31 '13 at 23:14
    
@Mse You'll want to comment out those lines from your ~/.bashrc file –  minerz029 Aug 31 '13 at 23:32
    
Oh, ok :P. But unfortunately, that didn't solve the problem. –  Msegade Aug 31 '13 at 23:37
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